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Marchantia polymorpha subsp. ruderalis

ABSTRACT: Genomic and transcriptomic analyses of the liverwort Marchantia polymorpha

PROVIDER: PRJDB8530 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	DRR184755_subreads.fastq.gz	Fastqsanger.gz
	DRR184756_subreads.fastq.gz	Fastqsanger.gz
	DRR184757_subreads.fastq.gz	Fastqsanger.gz
	DRR184758_subreads.fastq.gz	Fastqsanger.gz
	DRR186538.fastq.gz	Fastqsanger.gz

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Marchantia polymorpha subsp. ruderalis

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Project description:To understand a role of MpMET in maintenance of cytpsine methylation and transposon silencing, we obtained a genome wide profile of 5-methylated cytosine from the Mpmet mutant of a model liverwort, Marchantia polymorpha.

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High-light stress RNA-seq Marchantia polymorpha

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Marchantia polymorpha subsp. ruderalis

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Proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora

Project description:Here, we define the proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora. We sampled whole liverwort thalli that were mock-inoculated (water) or infected with P. palmivora zoospores at 4 and 8 days post inoculation (dpi). This analysis revealed the protein profiles of liverworts during the biotrophic (4 dpi) and necrotrophic (8 dpi) stages of pathogen infection. In combination with additional omics datasets, our analyses reveal conserved aspects in the molecular response to pathogen infection in liverworts and angiosperms.

2019-06-24 | PXD012076 | Pride

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