Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Oryza sativa Indica Group strain:IR64

ABSTRACT: de novo genome assembly of Oryza sativa ssp. indica cv. IR64

PROVIDER: PRJDB8810 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	BLLQ01.dat.gz	Other
	BLLQ01.fasta.gz	Fasta.gz
	BLLQ01.master.dat	Other
	DRR196879_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Oryza sativa Indica Group cultivar:IR64

Project description:Oryza sativa Indica Group cultivar:IR64 Genome sequencing

| PRJNA222761 | ENA

Oryza sativa Indica Group cultivar:IR64

Project description:Oryza sativa Indica Group cultivar:IR64 Genome sequencing

| PRJNA337128 | ENA

Oryza sativa indica group cultivar:IR64

Project description:Oryza sativa indica group cultivar:IR64 Genome sequencing

| PRJNA308519 | ENA

Oryza sativa Indica Group cultivar:IR64

Project description:Oryza sativa Indica Group cultivar:IR64 Transcriptome or Gene expression

| PRJNA292640 | ENA

Dynamics of the transcriptome and methylome during the regeneration of rice

Project description:Tissue culture is used to establish desired phenotypes in plants. Callus culture and regeneration are critical steps in this process. Calli of Oryza sativa japonica (cv. TNG67) and Oryza sativa indica (cv. IR64) have varying regeneration efficiencies. Genetic diversity could partly account for such differences but the epigenetic response to different cell culture environment could also play a role. We aimed to study the role of DNA methylation during the tissue culture process in determining its outcome.

2017-06-01 | GSE82138 | GEO

Oryza sativa Indica Group cultivar:IR64

Project description:Small RNA sequencing of oryza sativa 'IR64' at Taoyuan

| PRJNA436757 | ENA

ChIP-seq of Oryza sativa ssp. indica epilines

Project description:The contained data consist of Illumina NextSeq reads generated genomic DNA of Oryza sativa ssp. indica used for ChIP-seq analysis. The inbred control line and a derived epiline LR2 of the 5th selfing were analysed using chromatin immunoprecipitation sequencing.

2020-06-21 | E-MTAB-6982 | biostudies-arrayexpress

Oryza sativa Indica Group strain:Nagina 22

Project description:Oryza sativa ssp. Indica cv. Nagina 22 genome sequencing project

| PRJNA56083 | ENA

RNA sequencing of Oryza sativa ssp. indica of inbred and derived epilines

Project description:The contained data consist of Illumina HiSeq reads generated genomic RNA of Oryza sativa ssp. indica used for RNA-seq analysis. The inbred control line and derived epilines LR1, LR2 and LR3 of the 4th selfing were analysed using RNA-seq.

2020-03-04 | E-MTAB-6983 | biostudies-arrayexpress

Oryza sativa strain:- | isolate:- | breed:IR64 | cultivar:indica

Project description:Oryza sativa strain:- | isolate:- | breed:IR64 | cultivar:indica Transcriptome or Gene expression

| PRJNA511618 | ENA