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Dynamics of the transcriptome and methylome during the regeneration of rice

ABSTRACT: Tissue culture is used to establish desired phenotypes in plants. Callus culture and regeneration are critical steps in this process. Calli of Oryza sativa japonica (cv. TNG67) and Oryza sativa indica (cv. IR64) have varying regeneration efficiencies. Genetic diversity could partly account for such differences but the epigenetic response to different cell culture environment could also play a role. We aimed to study the role of DNA methylation during the tissue culture process in determining its outcome.

ORGANISM(S): Oryza sativa Japonica Group Oryza sativa Indica Group

PROVIDER: GSE82138 | GEO | 2017/06/01

SECONDARY ACCESSION(S): PRJNA324122

REPOSITORIES: GEO

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