Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Food fermentation metagenome

ABSTRACT: 16S V3-V4 amplicon sequencing

PROVIDER: PRJDB9082 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR200608_1.fastq.gz	Fastqsanger.gz
	DRR200608_2.fastq.gz	Fastqsanger.gz
	DRR200609_1.fastq.gz	Fastqsanger.gz
	DRR200609_2.fastq.gz	Fastqsanger.gz
	DRR200610_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 682

Similar Datasets

Hhigh-throughput sequencing of in vitro fecal fermentation samples

Project description:We report the use of high-throughput sequencing technology to detect the microbial composition and abundance of mice grastic contents before and after Helicobacter pylori infection or Lactobacillus paracasei ZFM54 pretreatment/treatment. The genomic DNA was obtained by the QIAamp PowerFecal DNA Kit. Then, the DNA samples were sent to BGI Genomics Co., Ltd. (Shenzhen, China) for V3-V4 region of the 16S rRNA gene high-throughput sequencing with an Illumina MiSeq platform. DNA samples were sequenced using primers 338F (forward primer sequence ACTCCTACGGGAGGCAGCAG)-806R (reverse primer sequence GGACTACHVGGGTWTCTAAT). The sequencing analyses were carried out using silva138/16s database as a reference for the assignation of Amplicon Sequence Variant (ASV) at 100% similarity.

2022-07-27 | GSE208665 | GEO

food fermentation metagenome

Project description:Amplicon sequencing of the meju -16S

| PRJDB8882 | ENA

food fermentation metagenome

Project description:16S rRNA amplicon sequencing of Nukadoko

| PRJDB17051 | ENA

food fermentation metagenome

Project description:16S and ITS amplicon sequencing (WYQ)

| PRJDB9347 | ENA

food fermentation metagenome

Project description:Amplicon sequencing of the fermented grain (16S)