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Lactococcus garvieae

ABSTRACT: Lactic acid bacteria from Okinawan-style tofu

PROVIDER: PRJDB9871 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	BLXU01.dat.gz	Other
	BLXU01.fasta.gz	Fasta.gz
	BLXU01.master.dat	Other

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1 - 4 of 4

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Limosilactobacillus fermentum

Project description:Lactic acid bacteria from Okinawan-style tofu and functional evaluation

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Lactococcus lactis subsp. lactis strain:Himuka-SU2

Project description:Lactic acid bacteria from coast

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Lactococcus lactis strain:Nagasaki-SU6

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Characterization of prophages of Lactococcus garvieae.

Project description:This report describes the morphological characterization and genome analysis of an induced prophage (PLg-TB25) from a dairy strain of Lactococcus garvieae. The phage belongs to the Siphoviridae family and its morphology is typical of other lactococcal phages. A general analysis of its genome did not reveal similarities with other lactococcal phage genomes, confirming its novelty. However, similarities were found between genes of its morphogenesis cluster and genes of Gram-positive bacteria, suggesting that this phage genome resulted from recombination events that took place in a heterogeneous microbial environment. An in silico search for other prophages in 16 L. garvieae genomes available in public databases, uncovered eight seemingly complete prophages in strains isolated from dairy and fish niches. Genome analyses of these prophages revealed three novel L. garvieae phages. The remaining prophages had homology to phages of Lactococcus lactis (P335 group) suggesting a close relationship between these lactococcal species. The similarity in GC content of L. garvieae prophages to the genomes of L. lactis phages further supports the hypothesis that these phages likely originated from the same ancestor.

| S-EPMC5431838 | biostudies-literature

Identification of Lactococcus garvieae by PCR.

Project description:Lactococcus garvieae junior synonym Enterococcus seriolicida) is an emerging zoonotic agent isolated from economically important fish (rainbow trout and yellowtail), from cattle, and from humans. Clindamycin susceptibility is the only phenotypic test which can differentiate L. garvieae from Lactococcus lactis, another emerging agent in humans. A PCR assay for the identification of L. garvieae was developed and resulted in an amplified fragment of 1,100 bp in size. The PCR assay was shown to be specific to L. garvieae. The PCR assay was positive for all the L. garvieae strains tested, which originated from three different continents (Asia, Australia, and Europe). The PCR assay was negative for the phenotypically similar L. lactis and for all the other fish pathogens tested, including Streptococcus iniae and Aeromonas salmonicida. The PCR assay was applied to plasma obtained from diseased animals and was found sensitive enough to detect bacteria from 1 microl of plasma. The PCR assay that was developed is the only practical test besides the clindamycin test which can specifically identify the zoonotic agent L. garvieae and which can differentiate it from L. lactis.

| S-EPMC104673 | biostudies-literature

Project description:lactic acid bacteria

| PRJNA933129 | ENA

Pediococcus pentosaceus/Lactiplantibacillus pentosus/Lactococcus lactis/Lactiplantibacillus plantarum

Project description:Genome of Lactic Acid Bacteria Isolated from Alfalfa phyllospheric

| PRJNA916374 | ENA

Lactococcus cremoris subsp. cremoris MG1363

Project description:Genome sequencing and methylomes of fermentative and commensal lactic acid bacteria

| PRJNA905838 | ENA

Genome sequences of Lactococcus garvieae TB25, isolated from Italian cheese, and Lactococcus garvieae LG9, isolated from Italian rainbow trout.

Project description:Lactococcus garvieae is a fish pathogen and an emerging zoonotic opportunistic pathogen as well as a component of natural microbiota in dairy products. Here, we present the first report of a genome sequence of L. garvieae TB25, isolated from a dairy source, and that of L. garvieae LG9, isolated from rainbow trout.

| S-EPMC3294776 | biostudies-literature

Transcriptome profiling of Lactococcus garvieae 21881 in response to different stress conditions

Project description:Transcriptome analysis of Lactococcus garvieae 21881 in response to different stress conditions: 42 ºC, high salt concentration and presence of linoleic acid.

2017-10-01 | GSE40356 | GEO

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