Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacterial Community Spatial and Temporal Variation in a North Temperate Bog Lake

PROVIDER: PRJEB15148 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1582020.fastq.gz	Fastqsanger.gz
	ERR1582030.fastq.gz	Fastqsanger.gz
	ERR1582040.fastq.gz	Fastqsanger.gz
	ERR1582050.fastq.gz	Fastqsanger.gz
	ERR1582060.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1505

Similar Datasets

Diel cycles of gene expression in oligotrophic, dystrophic, and eutrophic lakes to identify new gene functions and dissect carbon cycling metabolisms

Project description:Aquatic microbial communities contain a vast amount of genetic diversity and we have much to learn about how this manifests to functional diversity. Existing long-term time series data includes 16S tags, metagenomes, single amplified genomes (SAGs), and genomes from metagenomes (GFMs). Information about functional diversity and metabolic capabilities is often unavailable. The study sites include three lakes that are the subject of intense study through the North Temperate Lakes Long Term Ecological Research site: Sparkling Lake (oligotrophic), Lake Mendota (eutrophic), and Trout Bog Lake (dystrophic). The work (proposal:https://doi.org/10.46936/10.25585/60000947) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.

2023-11-02 | MSV000093272 | MassIVE

Project description:Temporal and spatial variation of bacterial community composition in the large, brackish, Lake Bosten, China

| PRJNA588508 | ENA

Project description:Peanut Rotation Soil's Bacterial Communities Spatial and Temporal variation

| PRJNA807434 | ENA

Project description:Spatial-temporal variation and co-occurrence patterns of bacterial communities in a large eutrophic lake

| PRJNA600623 | ENA

Spatial transcriptome uncovers rich coordination of metabolism and signaling in bacterial community (data 2)

Project description:Spatial transcriptome uncovers rich coordination of metabolism and signaling in bacterial community (data 2)

2023-03-01 | GSE213531 | GEO

Project description:Temporal and spatial variations of bacterial community compositions in two estuaries of Chaohu Lake

| PRJNA559027 | ENA

Regional Epigenetic Variation in Asexual Snail Populations among Urban and Rural Lakes

Project description:Epigenetic variation has the potential to control environmentally dependent development and contribute to phenotypic responses to local environments. Environmental epigenetic studies of sexual organisms confirm the responsiveness of epigenetic variation, which should be even more important when genetic variation is lacking. A previous study of an asexual snail, Potamopyrgus antipodarum, demonstrated that different populations derived from a single clonal lineage differed in both shell phenotype and methylation signature when comparing lake versus river populations. Here, we examine methylation variation among lakes that differ in environmental disturbance and pollution histories. The differential DNA methylation regions (DMRs) identified among the different lake comparisons suggested a higher number of DMRs and variation between rural Lake 1 and one urban Lake 2 and between the two urban Lakes 2 and 3, but limited variation between the rural Lake 1 and urban Lake 3. DMR genomic characteristics and gene associations were investigated. Observations suggest there is no effect of geographic distance or any consistent pattern of DMRs between urban and rural lakes. Environmental factors may influence epigenetic response.

2019-09-27 | GSE133502 | GEO

Project description:Spatial and temporal niche separation of Methanomassiliicoccales in temperate fens

| PRJNA918627 | ENA

Project description:Spatial and Temporal Variation in Nest and Egg Bacteria of tree swallows in North America

| PRJEB15144 | ENA