Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Establishment of Mixed microbial/methanotrophic consortia

PROVIDER: PRJEB17609 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1713661.fastq.gz	Fastqsanger.gz
	ERR1713662.fastq.gz	Fastqsanger.gz
	ERR1713663.fastq.gz	Fastqsanger.gz
	ERR1713664.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

A transcriptomics approach to compare transcriptomes of individual methylotrophs from Lake Washington sediment in artificial communities and in pure cultures.

Project description:We established simple synthetic microbial communities in a microcosm model system to determine the mechanisms that underlay cross-feeding in microbial methane-consuming communities. Co-occurring strains from Lake Washington sediment were used that are involved in methane consumption, a methanotroph and two non-methanotrophic methylotrophs.

2016-12-26 | GSE85736 | GEO

Project description:Enrichment of syngas-converting mixed microbial consortia

| PRJNA439372 | ENA

Engineering consortia by polymeric microbial swarmbots

Project description:Synthetic microbial consortia represent a new frontier for synthetic biology given that they can solve more complex problems than monocultures. However, most attempts to co-cultivate these artificial communities fail because of the ‘‘winner-takes-all’’ in nutrients competition. In soil, multiple species can coexist with a spatial organization. Inspired by nature, here we show that an engineered spatial segregation method can assemble stable consortia with both flexibility and precision. We create microbial swarmbot consortia (MSBC) by encapsulating subpopulations with polymeric microcapsules. The crosslinked structure of microcapsules fences microbes, but allows the transport of small molecules and proteins. MSBC method enables the assembly of various synthetic communities and the precise control over the subpopulations. These capabilities can readily modulate the division of labor and communication. Our work integrates the synthetic biology and material science to offer new insights into consortia assembly and server as foundation to diverse applications from biomanufacturing to engineered photosynthesis.

2022-07-04 | PXD034417 | Pride

Essay of parameters for ectoines production from biogas by methanotrophic consortia

Project description:Elucidating the key environmental parameters during the production of ectoines from biogas by mixed methanotrophic consortia

| PRJEB46055 | ENA

Project description:Metagenome sequencing of mixed microbial consortia from syngas enrichment cultures

| PRJNA450674 | ENA

Arginine-derived polyketides are ubiquitous signals shaping cross-kingdom microbial interactions

Project description:Microbial consortia consist of a multitude of prokaryotic and eukaryotic microorganisms. Their interaction is critical for the functioning of ecosystems. Until now, there is limited knowledge about the communication signals determining the interaction between bacteria and fungi and how they influence microbial consortia. Here, we discovered that bacterial low molecular weight arginine-derived polyketides trigger the production of distinct natural products in fungi. These compounds are produced by actinomycetes found on all continents except Antarctica and are characterized by an arginine-derived positively charged group linked to a linear or cyclic polyene moiety. Producer bacteria can be readily isolated from soil as well as fungi that decode the signal and respond with the biosynthesis of natural products. Both arginine-derived polyketides and the compounds produced by fungi in response shape microbial interactions.

2023-06-16 | PXD033242 | Pride

Project description:Polyhydroxyalkanoates production by mixed methanotrophic culture

| PRJNA1111824 | ENA

Gene expression of M. acetivorans producing ANME-1 Mcr during growth on methane vs. growth on methanol

Project description:Our goal is to convert methane efficiently into liquid fuels that may be more readily transported. Since aerobic oxidation of methane is less efficient, we focused on anaerobic processes to capture methane, which are accomplished by anaerobic methanotrophic archaea (ANME) in consortia. However, no pure culture capable of oxidizing and growing on methane anaerobically has been isolated. In this study, Methanosarcina acetivorans, an archaeal methanogen, was metabolically engineered to take up methane, rather than to generate it. To capture methane, we cloned the DNA coding for the enzyme methyl-coenzyme M reductase (Mcr) from an unculturable archaeal organism from a Black Sea mat into M. acetivorans to effectively run methanogenesis in reverse. The engineered strain produces primarily acetate, and our results demonstrate that pure cultures can grow anaerobically on methane.

2015-12-20 | GSE66445 | GEO

Project description:16S Amplicon sequences: lactic acid and lignocellulose bacteria mixed microbial consortia

| PRJNA734654 | ENA

Project description:Enrichment of Mesophilic and Thermophilic Mixed Microbial Consortia for Syngas Biomethanation

| PRJNA544940 | ENA