Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Whole genome sequencing of Abies sibirica (Siberian Fir) to construct a draft genome assembly.

PROVIDER: PRJEB1894 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR268414.fastq.gz	Fastqsanger.gz
	ERR268415_1.fastq.gz	Fastqsanger.gz
	ERR268415_2.fastq.gz	Fastqsanger.gz
	ERR268416_1.fastq.gz	Fastqsanger.gz
	ERR268416_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

Comparison between blue and green Spanish firs

Project description:Spanish fir (Abies pinsapo) is a relict tree that is found in southern Spain mountains. In natural conditions two phenotypes can be observed, trees with blue needles and trees with green needles. The aim of the present work is to elucidate at transcriptomic levels the possible causes of the differences between these phenotypes.

2021-11-20 | GSE189122 | GEO

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

Project description:Whole genome sequencing of Gnetum gnemon (Gnetum) to construct a draft genome assembly.

| PRJEB1895 | ENA

RNA-seq based in vivo transcriptomes of Korean fir (Abies koreana) with enhanced drought tolerance by Aureobasidium pullulans AK10

Project description:The conservation of the endangered Korean fir, Abies koreana, is of critical ecological importance. In our previous study, a yeast-like fungus identified as Aureobasidium pullulans AK10, was isolated and shown to enhance drought tolerance in A. koreana seedlings. In this study, the effectiveness of A. pullulans AK10 treatment in enhancing drought tolerance in A. koreana was confirmed. Furthermore, using transcriptome analysis, we compared A. koreana seedlings treated with A. pullulans AK10 to untreated controls under drought conditions to elucidate the molecular responses involved in increased drought tolerance.

2024-02-14 | GSE248350 | GEO

RNA-seq analysis of Selaginella kraussiana leaf, rhizophore, seedling and stem

Project description:Annotation of the draft assembly of selaginella kraussiana

2016-02-09 | GSE69388 | GEO

Project description:Whole genome sequencing of Taxus baccata (English Yew) to construct a draft genome assembly.

| PRJEB1897 | ENA

Whole genome sequencing of Pinus sylvestris

Project description:Whole genome sequencing of Pinus sylvestris (Scots Pine) to construct a draft genome assembly.

| PRJEB1898 | ENA

Project description:Whole genome sequencing of Juniperus communis (common juniper) to construct a draft genome assembly.

| PRJEB1896 | ENA

Project description:Siberian Sheep Whole Genome Sequencing