Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of multiple tissue types and developmental stages of Salvia hispanica (chia)

ABSTRACT: RNA-seq of multiple tissue types and developmental stages of Salvia hispanica (chia)

PROVIDER: PRJEB19614 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1855110_1.fastq.gz	Fastqsanger.gz
	ERR1855110_2.fastq.gz	Fastqsanger.gz
	ERR1855120_1.fastq.gz	Fastqsanger.gz
	ERR1855120_2.fastq.gz	Fastqsanger.gz
	ERR1855130_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 234

Similar Datasets

RNA-seq of multiple tissue types and developmental stages of Salvia hispanica (chia)

Project description:Salvia hispanica L. (chia) is a member of the mint family that is cultivated for its seeds. The majority of seed content in chia is comprised of omega fatty acids. Furthermore, chia seeds are also rich in fiber and minerals. The human health potential of chia seeds have driven studies of dietary effects, however there is little genetic or genomic studies available. In this study we obtained RNA from seeds, shoots, cotyledons, leaf primordia, nodes, racemes, and flower tissues from different developmental stages to generate an expression atlas for chia. RNA was sequenced on an Illumina Hiseq 2500. Sequence reads were assembled de novo to produce transcripts. Sequence reads were aligned to the chia transcriptome assembly to generate counts for each tissue type. Differentially expressed transcripts were determined for each tissue type.

2020-01-01 | E-MTAB-5515 | biostudies-arrayexpress

Unraveling Genotypic Proteomic Shifts in Salvia hispanica Seeds Exposed to Accelerated Aging

Project description:This Project investigates the impact of elevated temperatures and relative humidity on the aging process of chia seeds (Salvia hispanica L.). The study employs proteomics to examine molecular responses to accelerated aging in two chia genotypes. The results underscore the importance of evaluating changes in proteins of aged seeds to gain insights into the biological mechanisms responsible for maintaining chia seed integrity during the aging process.

2024-08-06 | PXD049229 | Pride

Salvia hispanica

Project description:Genome sequencing of the oilseed crop chia (Salvia hispanica)

| PRJDB12688 | ENA

Salvia hispanica

Project description:Salvia hispanica overview

| PRJNA196807 | ENA

Salvia hispanica

Project description:Transcriptomic responses of chia (Salvia hispanica) to the infestation of red spider mites (Tetranychus neocaledonicus)

| PRJDB16154 | ENA

Salvia hispanica

Project description:Salvia hispanica Transcriptome or Gene expression