Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacterial communities of rumen, lab-scale anaerobic reactor and enrichment cultures

ABSTRACT: Bacterial communities of rumen, lab-scale anaerobic reactor and enrichment cultures

PROVIDER: PRJEB19681 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR1856830.fastq.gz	Fastqsanger.gz
	ERR1856831.fastq.gz	Fastqsanger.gz
	ERR1856826.fastq.gz	Fastqsanger.gz
	ERR1856827.fastq.gz	Fastqsanger.gz
	ERR1856828.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Enrichment cultures of a lab-scale biogas fermenter

Project description:16S rRNA amplicon sequencing of enrichment cultures out of a lab-scale biogas fermenter

| PRJNA516126 | ENA

Sludge samples collected from lab-scale fermentation reactor

Project description:Sludge samples collected from lab-scale fermentation reactor Metagenome

| PRJNA934093 | ENA

Metagenome of lab-reactor for EBPR

Project description:Metagenome of lab-reactor for EBPR Genome sequencing and assembly

| PRJNA1018460 | ENA

Metatranscriptomes from lab-scale anaerobic digesters

Project description:Metatranscriptomes from lab-scale anaerobic digesters

| PRJNA713004 | ENA

Microbial community of MBBR-SBR lab-reactor

Project description:Microbial community of MBBR-SBR lab-reactor Raw sequence reads

| PRJNA1140425 | ENA

Degradation of methanethiol by methylotrophic methanogenic archaea in a lab-scale upflow anaerobic sludge blanket reactor.

Project description:In a lab-scale upflow anaerobic sludge blanket reactor inoculated with granular sludge from a full-scale wastewater treatment plant treating paper mill wastewater, methanethiol (MT) was degraded at 30 degrees C to H2S, CO2, and CH4. At a hydraulic retention time of 9 h, a maximum influent concentration of 6 mM MT was applied, corresponding to a volumetric loading rate of 16.5 mmol liter-1 day-1. The archaeal community within the reactor was characterized by anaerobic culturing and denaturing gradient gel electrophoresis analysis, cloning, and sequencing of 16S rRNA genes and quantitative PCR. Initially, MT-fermenting methanogenic archaea related to members of the genus Methanolobus were enriched in the reactor. Later, they were outcompeted by Methanomethylovorans hollandica, which was detected in aggregates but not inside the granules that originated from the inoculum, the microbial composition of which remained fairly unchanged. Possibly other species within the Methanosarcinacaea also contributed to the fermentation of MT, but they were not enriched by serial dilution in liquid media. The archaeal community within the granules, which was dominated by Methanobacterium beijingense, did not change substantially during the reactor operation. Some of the species related to Methanomethylovorans hollandica were enriched by serial dilutions, but their growth rates were very low. Interestingly, the enrichments could be sustained only in the presence of MT and did not utilize any of the other typical substrates for methylotrophic methanogens, such as methanol, methyl amine, or dimethylsulfide.

| S-EPMC1694231 | biostudies-literature

Lab-scale anaerobic digestion raw sequencing data

Project description:Lab-scale anaerobic digestion raw sequence reads

| PRJNA1125196 | ENA

Metagenome from a lab-scale anaerobic digester

Project description:Metagenome from a lab-scale anaerobic digester

| PRJNA712978 | ENA

anaerobic reactor metagenome

Project description:anaerobic reactor metagenome Metagenome

| PRJNA508359 | ENA

anaerobic fruit reactor

Project description:anaerobic fruit reactor Metagenome