Project description:TRD hatched preparasitc juveniles of line-22 from Globodera rostochiensis were collected and total RNA was isolated as described under ”Materials and methods” in the manuscript. Library prep was conducted using a ribosome depletion method. The same protocols and methods applies to Ro1-line19: SRR16693885

2023-12-25 | E-MTAB-13380 | biostudies-arrayexpress

Globodera rostochiensis

Project description:Globodera rostochiensis genotyping by sequencing raw reads

| PRJNA274953 | ENA

Globodera rostochiensis strain:Ro1

Project description:Globodera rostochiensis strain:Ro1 Raw sequence reads

| PRJNA314586 | ENA

Sequencing of Globodera rostochiensis

Project description:Assembly and annotation of the genome of the yellow potato cyst nematode Globodera rostochiensis

| PRJEB13504 | ENA

RNA-seq of Globodera rostochiensis: Ro5-line-22

Project description:RNA-seq of Globodera rostochiensis: Ro5-line-22

| PRJEB66473 | ENA

Compatible and incompatible infection of potato by nematode Globodera rostochiensis

Project description:Compatible and incompatible infection of potato by nematode Globodera rostochiensis

| PRJEB23306 | ENA

Gene expression in populations of the potato cyst nematode Globodera pallida in diapause or quiescence following hydration or exposure to tomato root diffusate

Project description:Plant-parasitic nematodes (PPN) need to be adapted to survive in the absence of a suitable host or in hostile environmental conditions. Various forms of developmental arrest (including desiccation, cryopreservation, hatching inhibition and dauer stages) are used by PPN in order to survive these conditions and spread to other areas. Potato cyst nematodes (PCN) (Globodera pallida and G. rostochiensis) are frequently in a dessicated state unhatched nematodes within the egg dispersal unit inside the cyst. Long term survival seems to be associated primarily with species that have a very restricted host range which requires surviving unhatched in the absence of the host for extended periods of time. This paper shows fundamental changes in the response of quiescent and diapaused eggs of G.pallida to hydration and following exposure to tomato root diffusate using microarray gene expression analysis from a broad set of genes. Surprisingly, many unique genes were activated in the population of diapaused eggs. Transport activity was activated in both quiescent and diapaused eggs; however, the transport function genes were very different between them. Hydrated quiescent and diapaused eggs were markedly different indicating differences in adaptation for long term survival.

2016-02-01 | E-MTAB-3824 | biostudies-arrayexpress

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