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Mali MDR-TB Genomics WANETAM

ABSTRACT: The rise of virulent genotypes and an emerging threat of multidrug resistant tuberculosis in Bamako, Mali

PROVIDER: PRJEB27446 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR2679250_1.fastq.gz	Fastqsanger.gz
	ERR2679250_2.fastq.gz	Fastqsanger.gz
	ERR2679260_1.fastq.gz	Fastqsanger.gz
	ERR2679260_2.fastq.gz	Fastqsanger.gz
	ERR2679270_1.fastq.gz	Fastqsanger.gz

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Mali MDR-TB Genomics

Project description:The rise of virulent genotypes and an emerging threat of multidrug resistant tuberculosis in Bamako, Mali

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Clinical risk factors associated with multidrug-resistant tuberculosis (MDR-TB) in Mali.

Project description:BACKGROUND:MDR-TB is a major threat to global TB control. In 2015, 580,000 were treated for MDR-TB worldwide. The worldwide roll-out of GeneXpert MTB/RIF® has improved diagnosis of MDR-TB; however, in many countries laboratories are unable to assess drug resistance and clinical predictors of MDR-TB could help target suspected patients. In this study, we aimed to determine the clinical factors associated with MDR-TB in Bamako, Mali. METHODS:We performed a cross-sectional study of 214 patients with presumed MDR-TB admitted to University of Bamako Teaching Hospital, Point-G between 2007 and 2016. We calculated crude and adjusted odds ratios for MDR-TB disease diagnosis using SPSS. RESULTS:We found that age ?40years (OR=2.56. 95% CI: 1.44-4.55), two courses of prior TB treatment (OR=3.25, 95% CI: 1.44-7.30), TB treatment failure (OR=3.82, 95% CI 1.82-7.79), sputum microscopy with 3+ bacilli load (OR=1.98, 95% CI: 1.13-3.48) and a history of contact with a TB patient (OR=2.48, 95% CI: 1.11-5.50) were significantly associated with confirmation of MDR-TB disease. HIV was not a risk factor for MDR-TB (aOR=0.88, 95% CI: 0.34-1.94). CONCLUSION:We identified several risk factors that could be used to identify MDR-TB suspects and prioritize them for laboratory confirmation. Prospective studies are needed to understand factors associated with TB incidence and clinical outcomes of TB treatment and disease.

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