Project description:Solanum torvum Sw is worldwide employed as rootstock for eggplant cultivation because of its vigour and resistance/tolerance to the most serious soil-borne diseasesas bacterial, fungal wilts and root-knot nematodes. A 30,0000 features custom combimatrix chip was designed and microarray hybridizations were conducted for both control and 14 dpi (day post inoculation) with Meloidogyne incognita-infected roots samples. We also tested the chip with samples from the phylogenetically-related nematode-susceptible eggplant species Solanum melongena.The genes identified from S. torvum catalogue, bearing high homology to knownnematode resistance genes, were further investigated in view of their potential role in the nematode resistance mechanism.

2013-11-01 | GSE47008 | GEO

Tea garden soil biome

Project description:Tea garden soil biome Raw sequence reads

| PRJNA1143986 | ENA

Tea plantation soil sample

Project description:Tea plantation soil sample Raw sequence reads

| PRJNA1104766 | ENA

metagenome of tea garden soil

Project description:metagenome of tea garden soil Metagenome

| PRJNA1064111 | ENA

Makibari Tea Garden Soil

Project description:Makibari and Castleton Tea Garden Soil Metagenomic assembly

| PRJNA766783 | ENA

Nematodes

Project description:Nematodes Metagenome

| PRJNA836018 | ENA

Investigating Relationship between Plant Hormones and Important Substances in Harvested Tea Leaves Before Withering

Project description:Senescence is initiated immediately in harvested tea leaves, and leads to physiological and biochemical changes, and could affects the final tea products. In the present work, we investigated the relationship between hormones and critical components in harvested tea leaves before withering, changes in hormones including abscisic acid (ABA), salicylic acid (SA), jasmonic acid (JA), and critical components like catechins, theanine, and caffeine were analyzed. Significant changes in these substances were identified and ABA correlated with catechin in harvested tea leaves before withering. RNA-seq transcriptome analysis revealed dramatic differences between tea samples at 1 h and 2 h compared with those at 0 h. The patterns of these three critical components correlated with the expression profiles of differentially expressed genes (DEGs). Weighted correlation network analysis of co-expressed genes revealed that genes in the mediumpurple2 module correlated with ABA and catechins. The results of this study suggest that harvested tea leaves before withering undergo significant hormonal changes (ABA, JA, and SA) and ABA may participate in regulating catechin biosynthesis.

2020-01-31 | GSE143970 | GEO

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