Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of wild-type Salmonella Typhimurium SL1344 in the presence and absence of chlorpromazine or Phe-Arg-Beta-Napthylamide

ABSTRACT: RNA-seq of wild-type Salmonella Typhimurium SL1344 in the presence and absence of chlorpromazine or Phe-Arg-Beta-Napthylamide

PROVIDER: PRJEB33710 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3453920_1.fastq.gz	Fastqsanger.gz
	ERR3453920_2.fastq.gz	Fastqsanger.gz
	ERR3453921_1.fastq.gz	Fastqsanger.gz
	ERR3453921_2.fastq.gz	Fastqsanger.gz
	ERR3453922_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

RNA-seq of wild-type Salmonella Typhimurium SL1344 in the presence and absence of chlorpromazine or Phe-Arg-Beta-Napthylamide

Project description:The aim of this experiment was to determine the changes in transcription caused by inhibition of efflux pumps by the Phe-Arg-Beta-Naptylamide (PABN) and chlorpromazine. Four biological replicates per condition were grown to mid-log phase in MOPS minimal media (OD600) and were exposed to the known efflux inhibitor PABN, and the proposed efflux inhibitor chlorpromazine at 100 µg/ml and 50 µg/ml, respectively. Exposure lasted for two hours. Total RNA was extracted and DNase-treated. The samples were sent to BGI, Hong Kong for sequencing by Illumina Hiseq 4000.

2020-06-01 | E-MTAB-8190 | biostudies-arrayexpress

Outer Membrane Target of the Efflux Inhibitor Phe-Arg-β-naphthylamide

Project description:Proof of an Outer Membrane Target of the Efflux Inhibitor Phe-Arg-β-naphthylamide from Random Mutagenesis

| PRJEB30347 | ENA

NS-PHE-2016-S4

Project description:NS-PHE-2016-S4 Metagenome

| PRJNA656711 | ENA

Xanthomonas prunicola strain:Arg-1 | isolate:Arg-1

Project description:Xanthomonas prunicola strain:Arg-1 | isolate:Arg-1 Genome sequencing and assembly

| PRJNA819403 | ENA

Salmonella Typhimurium SL1344 RiboPools/RiboZero comparison

Project description:Comparison of RiboPools and RiboZero rRNA depletion strategies in total RNA from Salmonella Typhimurium, strain SL1344

2019-12-10 | GSE132630 | GEO

Gene expression analysis of Salmonella enterica serovar Typhimurium strain SL1344 swap

Project description:We performed transcriptome abundance analysis of Salmonella Typhimurium strain SL1344 swap which has been genetically engineered to express the hns open-reading frame from the stpA promoter and the stpA open reading frame from the hns promoter. This strain is designated SL1344(swap). Transcript abundance was compared with that of wild-type SL1344. This comparison was performed to determine the effect of chromosome location of the expression of two related global regulators and how alterations to their expression patterns would impact on their regulons.

2013-11-09 | GSE52235 | GEO

Expression analysis of Salmonella enterica serovar Typhimurium strain SL1344 with and without plasmid R27

Project description:Investigation of gene expression level changes in Salmonella Typhiumurium SL1344 (R27) compared to the wild-type SL1344 strain when grown at different growth temperatures and growth phases.

2013-03-21 | GSE45347 | GEO

Arg C and Linezolid on Th17 cells

Project description:Arg C and Linezolid were added to differentiating Th17 cells for 96h. Cells were harvested and sorted according to proliferation cycle before being lysed and having their RNA extracted.

2020-10-15 | GSE159401 | GEO

NS-PHE-PGPR-2016-S3

Project description:NS-PHE-PGPR-2016-S3 Metagenome

| PRJNA656696 | ENA

NS-NHE-PHE-2016-C

Project description:NS-NHE-PHE-2016-C Metagenome

| PRJNA656705 | ENA