Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptomic profiles of the Mediterranean sponge species Aplysina aerophoba upon wounding by the specialist grazer Tylodina perversa

ABSTRACT: Transcriptomic profiles of the Mediterranean sponge species Aplysina aerophoba upon wounding by the specialist grazer Tylodina perversa

PROVIDER: PRJEB35868 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3766690_1.fastq.gz	Fastqsanger.gz
	ERR3766690_2.fastq.gz	Fastqsanger.gz
	ERR3766700_1.fastq.gz	Fastqsanger.gz
	ERR3766700_2.fastq.gz	Fastqsanger.gz
	ERR3766710_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 80

Similar Datasets

Transcriptomic profiles of the Mediterranean sponge species Aplysina aerophoba upon wounding by the specialist grazer Tylodina perversa

Project description:In the seabed, chemical defences mediate inter- and intraspecific interactions and may determine organisms’ success, shaping the diversity and function of benthic communities. Sponges represent a prominent example of chemically-defended marine organisms with great ecological success. The ecological factors controlling the production of their defensive compounds and the evolutionary forces that select for these defences remain little understood. Each sponge species produces a specific and diverse chemical arsenal with fish-deterrent, antifouling and antimicrobial properties. However, some small animals (mesograzers), mainly sea slugs, have specialized in living and feeding on sponges. Feeding on chemically-defended organisms provides a strategy to avoid predators, albeit the poor nutritional value of sponges. In order to investigate the mechanisms that control sponge chemical defence, with particular focus on the response to specialist grazers, we investigated the interaction between the sponge Aplysina aerophoba and the sea slug Tylodina perversa. Here we performed controlled experiments and collected sponge samples at different time points (3h, 1d and 6d after treatment). To further elucidate if the sponge response is specific to grazing by T. perversa, we also included a treatment in which sponges were mechanically damaged with a scalpel. We compared gene expression between treatments based on RNA-Seq data.

2022-01-30 | E-MTAB-8601 | biostudies-arrayexpress

Wounding-induced transcriptomic responses in the sponge Aplysina aerophoba

Project description:Transcriptomic profiles of the sponge Aplysina aerophoba in response to wounding

| PRJEB46965 | ENA

Aplysina aerophoba

Project description:Aplysina aerophoba overview

| PRJNA374370 | ENA

Aplysina aerophoba breed:marine sponge

Project description:Aplysina aerophoba breed:marine sponge Genome sequencing

| PRJNA545297 | ENA

Aplysina aerophoba microbiome

Project description:Aplysina aerophoba microbiome Raw sequence reads