Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Yersinia enterocolitica outbreak investigation 2018

ABSTRACT: Yersinia enterocolitica outbreak investigation 2018

PROVIDER: PRJEB41706 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Yersinia enterocolitica outbreak investigation 2018

Project description:Yersinia enterocolitica outbreak investigation 2018

| PRJEB41733 | ENA

Whole transcriptome sequencing of phage φR1-37 and its host Yersinia enterocolitica

Project description:RNA-sequencing was preformed from RNA isolated from bacteria infected with the bacteriophage. In order to reveal the phage-host interactions between φR1-37 and Yersinia enterocolitica throughout the phage infection cycle, both the transcriptomes were scrutinized during all the stages of infection.

2016-01-22 | GSE77068 | GEO

Yersinia enterocolitica Nottingham

Project description:Yersinia enterocolitica Nottingham

| PRJEB2116 | ENA

Yersinia enterocolitica biotypes

Project description:Yersinia enterocolitica biotypes

| PRJEB2087 | ENA

Yersinia enterocolitica subsp. enterocolitica

Project description:Yersinia enterocolitica subsp. enterocolitica Genome sequencing and assembly

| PRJNA430492 | ENA

Analysis of differentially expressed proteins in Yersinia enterocolitica-infected HeLa cells

Project description:The purpose of our study was to fill this knowledge gap and to characterize the epithelial cell response to Yersinia enterocolitica infection by label-free proteomic quantification.

2022-02-22 | PXD002634 | Pride

Yersinia enterocolitica

Project description:Yersinia enterocolitica Raw sequence reads

| PRJNA812276 | ENA

Yersinia enterocolitica bioserotype 4/O3 clusters in Finland, 2017-2018

Project description:Yersinia enterocolitica bioserotype 4/O3 clusters in Finland, 2017-2018

| PRJEB42166 | ENA

Gene expression analysis of Peyers patches after infection of C57BL/6 mice with Yersinia enterocolitica

Project description:Orogastral infection of mice with Yersinia enterocolitical leads to HIF-1 alpha activation.To elucidate whether this HIF-1 alpha activation also results in a HIF-1 dependent gene programming, the transcriptomes from Peyers Patches of uninfected and Yersinia enterocolitica infected mice were analyzed by means of of microarray analyses using Affymetrix GeneChip probe arrays (MG-U74Av2). In total, 288 genes were differentially regulated three day after infection in PP compared with the expression of uninfected control mice. Of these 288 genes, 217 were found to be differentially upregulated and from these, 14 genes ( 6.5% of all upregulated genes) are well described to be regulated via HIF-1. These data indicate that orogatral infection with Y. enterocolitica results in HIF-1 dependent gene programmning Keywords: Time course

2007-11-10 | GSE9558 | GEO

Comparative genome hybridization of Enteropathogenic Yersinia

Project description:Enteropathogenic Yersinia enterocolitica and Yersinia pseudotuberculosis share many traits in terms of infections they cause, but their epidemiology and ecology seem to differ in many ways. Pigs are the only known reservoir for Y. enterocolitica 4/O:3 strains while Y. pseudotuberculosis strains have been isolated from variety of sources including fresh vegetables and wild animals. A comparative genomic hybridization (CGH) analysis with a DNA microarray based on three Yersinia enterocolitica and four Yersinia pseudotuberculosis genomes was conducted to shed light on genomic differences between the enteropathogenic Yersinia. In total 99 strains isolated from various sources were hybridized and analyzed.

2015-10-01 | GSE67565 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data