Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Small farm holder cropping systems influence microbial pro-files in an equatorial rainforest agroecosystem

ABSTRACT: Small Farm Holder Cropping Systems Drive Soil Properties and Microbial Profiles in an Equatorial Rainforest Agroecosystem

PROVIDER: PRJEB44367 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR6279630_1.fastq.gz	Fastqsanger.gz
	ERR6279630_2.fastq.gz	Fastqsanger.gz
	ERR6279640_1.fastq.gz	Fastqsanger.gz
	ERR6279640_2.fastq.gz	Fastqsanger.gz
	ERR6279631_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 28

Similar Datasets

Structure and variation in microbiome from continuous and rotational Pinellia ternata cropping soils

Project description:We used wheat as rotational crop to assess the influence of continuous cropping on microbiome in Pinellia ternata rhizosphere and the remediation of rotational cropping to the impacted microbiota. Illumina high-throughput sequencing technology was utilized for this method to explore the rhizosphere microbial structure and diversity based on continuous and rotational cropping.

2016-12-10 | GSE91083 | GEO

Dissecting the Variations of Ripening Progression and Flavonoid Metabolism in Grape Berries Grown under Double Cropping System

Project description:A double cropping system has been commercially adopted in subtropical regions in southern China, where there is abundant sunshine and heat resources. In this viticulture system, the first growing season normally starts as a summer cropping cycle; then, the vine is pruned and forced by hydrogen cyanamide, resulting in a second crop in January of the next year. Due to climate differences between the two growing seasons, flavonoid content and composition varies greatly. In this study, changes in the transcriptome of flavonoid-associated pathways were compared in berries grown under the double cropping system; in addition, the accumulation of flavonoid compounds was compared. Specific alterations in MYB transcription factors occurred in winter cropping berries around veraison. Then, the winter cropping cycle distinctly induced the flavonoid metabolic pathways while triggering the ripening-associated pathways. Notably, the climate conditions in winter cropping positively affected flavonoid biosynthesis, while the summer season took a major toll on anthocyanin accumulation. In addition, the three classes of flavonoid compounds responded differently to the changing climate; the anthocyanins and flavonols were promoted several fold, whereas no consistent increase was found for flavan-3-ols. Conclusively, flavonoid biosynthesis in grapes grown under a double cropping system showed seasonal or climatic-specific accumulation patterns.

2017-10-01 | GSE103226 | GEO

Belum Rainforest Virome

Project description:Belum Rainforest Virome

| PRJEB47000 | ENA

Shotgun analysis of dairy livestock agroecosystem

Project description:Shotgun analysis of dairy livestock agroecosystem

| PRJEB46212 | ENA

Dissecting the Variations of Transcriptome in Grape Berries Grown under Double Cropping System

2018-11-30 | GSE122411 | GEO

Rickettsia parkeri strain:Atlantic Rainforest

Project description:Rickettsia parkeri strain:Atlantic Rainforest Genome sequencing

| PRJNA542380 | ENA

Soybean continuous cropping soil

Project description:Soybean continuous cropping soil microbial raw sequence reads

| PRJNA564059 | ENA

population genomics of rainforest sunskinks

Project description:Population gemonics of the common rainforest sunskink Lampropholis coggeri

| PRJEB19238 | ENA

Reveal seasonal climatic variations affect terpenes, norisoprenoids, and green leaf volatiles accumulation in four grape varieties under a double cropping system

Project description:We determined the RNA sequence of V. vinifera cv. Victoria and V. vinifera cv. Muscat Hamburg grapes to reveal the transcriptomics variations between summer and winter berries under a double cropping system. Transcriptomics analysis showed that the upregulated VviDXSs, VviPSYs, and VviCCDs expressions might contribute to accumulations of terpenes or norisoprenoids in winter berries.

2021-03-13 | GSE168785 | GEO

Sequencing of an agricultural soil in a Mediterranean agroecosystem

Project description:Sequencing of an agricultural soil in a Mediterranean agroecosystem

| PRJNA734515 | ENA