Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mcr-1-carrying Enterobacteriaceae from chicken meat

ABSTRACT: Occurrence of mcr-1-carrying Enterobacteriaceae from chicken meat supplied from Portuguese farms

PROVIDER: PRJEB44904 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	CAJSMI01.dat.gz	Other
	CAJSMI01.fasta.gz	Fasta.gz
	CAJSMI01.master.dat	Other
	CAJSMJ01.dat.gz	Other

Items per page:

1 - 5 of 41

Similar Datasets

Genetic Analysis of Plasmid-Encoded mcr-1 Resistance in Enterobacteriaceae derived from poultry meat.

Project description:Genetic Analysis of Plasmid-Encoded mcr-1 Resistance in Enterobacteriaceae derived from poultry meat.

| PRJEB44175 | ENA

Enterobacteriaceae carrying blaSHV-12 and mcr-9

Project description:A link between the newly described colistin resistance gene mcr-9 and Enterobacteriaceae clinical isolates carrying blaSHV-12 from horses in Sweden

| PRJEB32700 | ENA

mcr-1 and mcr-2-isolates in German pig fattening farms

Project description:mcr-1 and mcr-2-isolates in German pig fattening farms

| PRJEB18999 | ENA

Gene expression microarray data by Moutan Cortex Radicis (MCR) in the LPS-stimulated human gingival fibroblast

2012-06-28 | GSE38977 | GEO

Spread of mcr-1-carrying Enterobacteriaceae in sewage water from Spain.

Project description:ObjectivesThe mobile colistin resistance gene mcr-1 has been identified worldwide in human and animal sources, while its occurrence in the environment is still largely unknown. The aim of this study was to investigate the presence of mcr-1 -harbouring Enterobacteriaceae in water samples obtained from rivers and waste water treatment plants in the area of Barcelona, Spain.MethodsThe presence of mcr-1 was detected by PCR. Bacterial identification was performed via MALDI-TOF MS. Resistance to colistin was determined by a broth dilution method. The epidemiological relationship between the positive isolates was assessed with PFGE and ST was determined by MLST. Plasmid characterization was performed by transformation experiments, antimicrobial susceptibility testing and incompatibility group PCR.ResultsThirty MDR isolates bearing mcr-1 , 29 Escherichia coli (ST632 and ST479) and 1 Klebsiella pneumoniae (ST526), were identified in sewage from two different waste water treatment plants, whereas the gene was not found in river water. All isolates, including the K. pneumoniae , harboured bla CTX-M-55 and bla TEM-1 . mcr-1 was in all cases associated with an IncI2 plasmid, which only conferred resistance to colistin. mcr-1 was harboured by two predominant E. coli clones that were found in both waste water treatment plants.ConclusionsThis study showed a high occurrence of mcr-1 in the sewage of Barcelona, mainly due to the dissemination of two E. coli pulsotypes that are circulating in the population. The presence of mcr-1 in the environment is a cause for concern, and suggests high prevalence of mcr-1 in the community.

| S-EPMC5890673 | biostudies-literature

Colistin-Resistant Enterobacteriaceae Carrying the mcr-1 Gene among Patients in Hong Kong.

Project description: Not available

| S-EPMC4994376 | biostudies-literature

Mcr-5 harboring Salmonella enterica serovar Typhimurium from pig production and meat

Project description:Characterization of mcr-5 harbouring Salmonella enterica subsp. enterica serovar Typhimurium from pig production and (pork) meat

| PRJEB30493 | ENA

Gene expression microarray data by Moutan Cortex Radicis (MCR) in the LPS-stimulated human gingival fibroblast

Project description:The Moutan Cortex Radicis (MCR) has been used as an analgesic, sedative and anti-inflammatory agent. This study investigated the changes in gene expression by MCR treatment when stimulated with lipopolysaccharide (LPS) in cultured human gingival fibroblasts (HGFs) and the gene expression changes by the MCR when challenged with LPS using a microarray chip. Human gingival fibroblast were divided into three experimental groups; 1, C: Control, 2, LPS: LPS-treatment only, 3, MCR40: LPS- and MCR40-treatments. Total RNA was isolated from each experimental fibroblast (3 experimental group M-CM-^W 1 sample of each experimental group = total 3 samples).

2012-06-27 | E-GEOD-38977 | biostudies-arrayexpress

mcr-1-Positive Enterobacteriaceae in Russia

Project description:Analysis of 22 E.coli and 2 K.pneumoniae isolates with plasmid-borne mcr-1.1 gene.

| PRJEB53051 | ENA

B. subtilis response to rotten meat volatiles.

Project description:To find a promoter upregulated in the presence of rotten meat, we exposed B. subtilis 168 to the volatiles of rotten meat (mixed beef/pork) and performed a microarray comparing it to B. subtilis which was not exposed to the meat. The results where used to build iGEM Groningen 2012s Food Warden, a spoiled meat detector. Find more information at: 2012.igem.org/Team:Groningen

2013-09-04 | GSE50538 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data