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RNA Sequencing of CDC27 downregulation in SK-N-SH cells

ABSTRACT: RNA Sequencing of CDC27 downregulation in SK-N-SH cells

PROVIDER: PRJEB49312 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR7625770.fastq.gz	Fastqsanger.gz
	ERR7625771.fastq.gz	Fastqsanger.gz
	ERR7625772.fastq.gz	Fastqsanger.gz
	ERR7625767.fastq.gz	Fastqsanger.gz
	ERR7625768.fastq.gz	Fastqsanger.gz

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RNA Sequencing of CDC27 downregulation in SK-N-SH cells

Project description:SK-N-SH cells were transfected with siRNA (si-CDC27 or si-control as a control). RNA sequencing was applied to detect the downstream molecules regulated by CDC27.

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Project description:Aim: to detect genes that are differentially transcribed in neuronal cells(SK-N-SH) over-expressing either of the two MECP2 isoforms, MECP2_e1 or MECP2_e2. Methods: the human neuroblastoma cell line SK-N-SH was stably infected by lentiviral vectors over-expressing MECP2_e1, MECP2_e2, or eGFP, and were then differentiated into neurons. RNA extracted, and used for gene expression microarray analysis

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polyA mRNA RNA-seq from SK-N-SH (ENCSR000CTT)

Project description:The libraries contained in this experiment come from the whole cell fraction of independent growths of cell line SK-N-SH. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

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polyA mRNA RNA-seq from SK-N-SH (ENCSR000CTS)

Project description:The libraries contained in this experiment come from the nuclear fraction of independent growths of cell line SK-N-SH. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Poly-A+ RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

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