Project description:We performed whole genome single nucleotide polymorphism (SNP) based analysis of all available Venezuelan equine encephalitis (VEE) virus antigenic complex genomes and developed a high resolution genome-wide SNP microarray. We used the SNP microarray to analyze a broad panel of VEEV isolates, found excellent concordance between array and sequence based genotypes for previously sequenced strains, and genotyped unsequenced strains.
Project description:This SuperSeries is composed of the following subset Series: GSE23120: Basal gene expression data from Human Variation Panel GSE24245: Genome-wide SNP array data from Human Variation Panel by Illumina 510S GSE24260: Genome-wide SNP array data from Human Variation Panel by Illumina 550K GSE24274: Genome-wide SNP array data from Human Variation Panel by Illumina 650K Refer to individual Series
Project description:Bone marrow macrophages were cultured from 16 week old apoE-deficient F2 mice from an AKRxDBA/2 intercross Gene expression profiling was performed using Affy 430v2 arrays, and 1967 informative SNP markers were genotyped for each mouse Supplementary file of SNP data attached below from ParAllele 5K mouse linkage panel Keywords: Genetic-genomic