Project description:Yeast knockout collection TAG microarrays are an emergent platform for rapid, genome-wide functional characterization of yeast genes. We describe a method for analyzing two-color array data to efficiently represent differential knockout strain representation across two experimental conditions. Using a fully defined spike-in pool, we show that the sensitivity and specificity of this method exceed typical current approaches. Keywords: Saccharomyces cerevisiae, yeast, self_vs_self, spike-in pools

2005-09-02 | GSE2832 | GEO

National Institute of Neurological Disorders and Stroke (NINDS) Repository Parkinson's Disease Collection

Project description:National Institute of Neurological Disorders and Stroke (NINDS) Repository Parkinson's Disease Collection

| PRJNA75381 | ENA

yeast wt-matA pool

Project description:Contains a collection of wildtype matA Saccharomyces cerevisiae strains for estimating the biological variation.

2012-11-14 | GSE42240 | GEO

yeast wt-matA pool

Project description:Contains a collection of wildtype matA Saccharomyces cerevisiae strains for estimating the biological variation. Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. Two independent cultures were hybridized on two separate microarrays.

2012-11-14 | E-GEOD-42240 | biostudies-arrayexpress

yeast wt pool

Project description:Contains a collection of wildtype Saccharomyces cerevisiae strains for estimating the biological variation. Wildtypes are obtained from the yeast wildtypes - wt pool background set HybSet, by randomly taking 100 wt vs. refpool (pooled wts) and 100 refpool vs. wt hybridizations Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. Two independent cultures were hybridized on two separate microarrays.

2012-11-14 | E-GEOD-42215 | biostudies-arrayexpress

yeast wt pool - plate reader

Project description:Contains a collection of wildtype Saccharomyces cerevisiae strains for estimating the biological variation. Wildtypes are obtained from the yeast wildtypes – platereader, wt pool background set HybSet, by randomly taking 100 wt vs. refpool (pooled wts) and 100 refpool vs. wt hybridizations Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. Two independent cultures were hybridized on two separate microarrays.

2012-11-14 | E-GEOD-42217 | biostudies-arrayexpress

yeast wt-matA pool - plate reader

Project description:Contains a collection of wildtype matA Saccharomyces cerevisiae strains grown using a Tecan platereader for estimating the biological variation. Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. Two independent cultures were hybridized on two separate microarrays.

2012-11-14 | E-GEOD-42241 | biostudies-arrayexpress

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