Seasonal microbial plankton dynamics reveals the ecological importance of fungi in aquatic food webs of hypertrophic shallow lakes
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PROVIDER: PRJEB64586 | ENA |
REPOSITORIES: ENA
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Project description:Seasonal microbial plankton dynamics in fungal plankton aquatic food webs of hypertrophic shallow lakes under high fish stock index
| PRJEB64587 | ENA
Project description:Seasonal microbial plankton dynamics in bacterial plankton aquatic food webs of hypertrophic shallow lakes
| PRJEB64584 | ENA
Project description:Seasonal microbial plankton dynamics in fungall plankton aquatic food webs of hypertrophic shallow lakes
| PRJEB64585 | ENA
Project description:Zooplankton blooms are a frequent phenomenon in tropical systems. However, drivers of bloom formation and the contribution of emerging resting eggs are largely unexplored. We investigated the dynamics and the triggers of rotifer blooms in African soda-lakes and assessed their impact on other trophic levels. A meta-analysis of rotifer peak densities including abundances of up to 6 × 105 individuals L-1 demonstrated that rotifer bloom formation was uncoupled from the food environment and the seasonality of climatic conditions. A time series with weekly sampling intervals from Lake Nakuru (Kenya) revealed that intrinsic growth factors (food quality and the physicochemical environment) significantly affected rotifer population fluctuations, but were of minor importance for bloom formation. Instead, rotifer bloom formation was linked to sediment resuspension, a prerequisite for hatching of resting-eggs. Population growth rates exceed pelagic birth rates and simulations of rotifer dynamics confirmed the quantitative importance of rotifer emergence from the sediment egg-bank and signifying a decoupling of bloom formation from pelagic reproduction. Rotifer blooms led to a top-down control of small-sized algae and facilitated a switch to more grazing-resistant, filamentous cyanobacteria. This shift in phytoplankton composition cascaded up the food chain and triggered the return of filter-feeding flamingos. Calculations of consequent changes in the lake's energy budget and export of aquatic primary production to terrestrial ecosystems demonstrated the large potential impact of nonseasonal disturbances on the functioning of shallow tropical lakes.
| S-EPMC4981947 | biostudies-literature
Project description:Heterotrophic nanoflagellates (HNF) and ciliates are major protistan planktonic bacterivores. The term HNF, however, describes a functional guild only and, in contrast to the morphologically distinguishable ciliates, does not reflect the phylogenetic diversity of flagellates in aquatic ecosystems. Associating a function with taxonomic affiliation of key flagellate taxa is currently a major task in microbial ecology. We investigated seasonal changes in the HNF and ciliate community composition as well as taxa-specific bacterivory in four hypertrophic freshwater lakes. Taxa-specific catalyzed reporter deposition-fluorescence in situ hybridization probes assigned taxonomic affiliations to 51%-96% (average ±SD, 75 ± 14%) of total HNF. Ingestion rates of fluorescently labelled bacteria unveiled that HNF contributed to total protist-induced bacterial mortality rates more (56%) than ciliates (44%). Surprisingly, major HNF bacterivores were aplastidic cryptophytes and their Cry1 lineage, comprising on average 53% and 24% of total HNF abundance and 67% and 21% of total HNF bacterivory respectively. Kinetoplastea were important consumers of bacteria during summer phytoplankton blooms, reaching 38% of total HNF. Katablepharidacea (7.5% of total HNF) comprised mainly omnivores, with changing contributions of bacterivorous and algivorous phylotypes. Our results show that aplastidic cryptophytes, accompanied by small omnivorous ciliate genera Halteria/Pelagohalteria, are the major protistan bacterivores in hypertrophic freshwaters.
| S-EPMC9788210 | biostudies-literature
Project description:Structure and dynamics of bacterioplankton from Pampean shallow lakes
| PRJEB46122 | ENA
Project description:Elevated allochthonous inputs of organic matter are increasingly recognized as a driver of ecosystem change in lakes, particularly when concurrent with eutrophication. Evaluation of lakes in a nutrient-color paradigm (i.e., based on total phosphorus and true color) enables a more robust approach to research and management. To assess temporal and spatial patterns in nutrient-color status for U.S. lakes and associated food web attributes, we analyzed the U.S. Environmental Protection Agency's National Lakes Assessment (NLA) data. With 1000+ lakes sampled in 2007 and 2012 in a stratified random sampling design, the NLA enables rigorous assessment of lake condition across the continental U.S. We demonstrate that many U.S. lakes are simultaneously experiencing eutrophication and brownification to produce an abundance of "murky" lakes. Overall, "blue" lakes decreased by ~ 18% (46% of lakes in 2007 to 28% in 2012) while "murky" lakes increased by almost 12% (24% of lakes in 2007 to 35.4% in 2012). No statistical differences were observed in the proportions of "green" or "brown" lakes. Regionally, murky lakes significantly increased in the Northern Appalachian, Southern Plains, and Xeric ecoregions. Murky lakes exhibited the highest epilimnetic chlorophyll a concentrations, cyanobacterial densities, and microcystin concentrations. Total zooplankton biomass was also highest in murky lakes, primarily due to increased rotifer and copepod biomass. However, zooplankton : phytoplankton biomass ratios were low, suggesting reduced energy transfer to higher trophic levels. These results emphasize that many lakes in the U.S. are simultaneously "greening" and "browning", with potentially negative consequences for water quality and food web structure.
| S-EPMC6961962 | biostudies-literature
Project description:Submersed aquatic plants are a key component of shallow, clear water lakes contributing to primary production and water quality. High mountain lakes are naturally fishless although invasive trout and most recently minnows have been introduced causing a major impact on fauna richness. The Pyrenean high mountain range has preserved soft-water oligotrophic boreal isoetids in their southern limit of distribution but the recent fish introduction is a potential factor of stress that needs to be addressed. We here work under the hypothesis that due to contrasting ecological features, trout will not be heavily affecting quillwort populations while minnows will have a stronger effect on zooplankton and zoobenthos that will promote algal growth and reduce light availability for the underwater meadows. Ten Pyrenean shallow lakes representative of three scenarios -fishless, with trout and with minnows-, were sampled for meadow structure, water column and benthic environment characterization in mid-summer 2015 and 2016. Quillwort biomass allocation (above vs. belowground), epiphytic load, and composition of the algal community (abundant cyanobacteria) differed in the presence of minnows. In trout lakes biomass allocation and epiphytic load were average and the algal community composed by chlorophytes and diatoms as in fishless lakes. Biomass ratio was close to thresholds of negative buoyancy in minnow lakes indicating that meadows were at risk of uprooting and consequent de-vegetation. Total and soluble carbohydrates were lower and the sporangia contained significantly less reserves to constrain growth and expansion in the presence of minnows. Lake scenarios were coupled to physicochemical differences with low light, high phosphorus and Chl-a (mesotrophia) in minnow lakes, while trout and fishless lakes remained oligotrophic. This is the first study assessing the impact of non-native fish on soft-water isoetids from mountain lakes and shows that minnows are a major threat to quillworts. The impaired light environment (from epiphytic algal overgrow and water column Chl-a) entails consequent regression (i.e., no recruitment) and de-vegetation (uprooting) of the meadows. Since soft-water oligotrophic mountain lakes are protected under the Habitats Directive, some action needs to be urgently implemented not only to preserve quillworts but to the overall ecological integrity of the lakes.
| S-EPMC5874306 | biostudies-other
Project description:Hydraulic pulling forces arising from wave action are likely to limit the presence of freshwater macrophytes in shallow lakes, particularly those with soft sediments. The aim of this study was to develop and test experimentally simple models, based on linear wave theory for deep water, to predict such forces on individual shoots.Models were derived theoretically from the action of the vertical component of the orbital velocity of the waves on shoot size. Alternative shoot-size descriptors (plan-form area or dry mass) and alternative distributions of the shoot material along its length (cylinder or inverted cone) were examined. Models were tested experimentally in a flume that generated sinusoidal waves which lasted 1 s and were up to 0.2 m high. Hydraulic pulling forces were measured on plastic replicas of Elodea sp. and on six species of real plants with varying morphology (Ceratophyllum demersum, Chara intermedia, Elodea canadensis, Myriophyllum spicatum, Potamogeton natans and Potamogeton obtusifolius).Measurements on the plastic replicas confirmed predicted relationships between force and wave phase, wave height and plant submergence depth. Predicted and measured forces were linearly related over all combinations of wave height and submergence depth. Measured forces on real plants were linearly related to theoretically derived predictors of the hydraulic forces (integrals of the products of the vertical orbital velocity raised to the power 1.5 and shoot size).The general applicability of the simplified wave equations used was confirmed. Overall, dry mass and plan-form area performed similarly well as shoot-size descriptors, as did the conical or cylindrical models of shoot distribution. The utility of the modelling approach in predicting hydraulic pulling forces from relatively simple plant and environmental measurements was validated over a wide range of forces, plant sizes and species.
| S-EPMC4242204 | biostudies-other
Project description:The presence of dense macrophyte canopies in shallow lakes locally generates thermal stratification and the buildup of labile organic matter, which in turn stimulate the biological oxygen demand. The occurrence of hypoxic conditions may, however, be buffered by strong wind episodes, which favor water mixing and reoxygenation. The present study aims at explicitly linking the wind action and water oxygenation within dense hydrophytes stands in shallow lakes. For this purpose, seasonal 24 h-cycle campaigns were carried out for dissolved gases and inorganic compounds measurements in vegetated stands of an oligo-mesotrophic shallow lake. Further, seasonal campaigns were carried out in a eutrophic shallow lake, at wind-sheltered and -exposed sites. Overall results showed that dissolved oxygen (DO) daily and seasonal patterns were greatly affected by the degree of wind exposure. The occurrence of frequent wind episodes favored the near-bottom water mixing, and likely facilitated mechanical oxygen supply from the atmosphere or from the pelagic zone, even during the maximum standing crop of plants (i.e., summer and autumn). A simple model linking wind exposure (Keddy Index) and water oxygenation allowed us to produce an output management map, which geographically identified wind-sheltered sites as the most subjected to critical periods of hypoxia.
| S-EPMC8309138 | biostudies-literature