Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

PiPlaSpea

ABSTRACT: Plagiopyla sp. strain OYSTR

PROVIDER: PRJEB65644 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	piPlaSpea1.Oscillospiraceae_2.1.primary.fa.gz	Other
	piPlaSpea1.Trichlorobacter_sp_1.1.primary.fa.gz	Other
	piPlaSpea1.Prolixibacteraceae_6.1.primary.fa.gz	Other
	piPlaSpea1.metagenome.1.primary.fa.gz	Other

Items per page:

1 - 5 of 38

Similar Datasets

piPlaSpeb

Project description:Plagiopyla sp. strain JUDRED

| PRJEB69483 | ENA

piPlaSpec

Project description:Plagiopyla sp. strain F1A

| PRJEB65646 | ENA

Plagiopyla

Project description:Plagiopyla sp. overview

| PRJNA1012094 | ENA

piPlaSpeb

Project description:Plagiopyla sp. strain JUDRED, genomic and transcriptomic data

| PRJEB69482 | ENA

piPlaSpea

Project description:Plagiopyla sp. strain OYSTR, genomic and transcriptomic data

| PRJEB65643 | ENA

piPlaSpec

Project description:Plagiopyla sp. strain F1A, genomic and transcriptomic data

| PRJEB65645 | ENA

piPlaFron

Project description:Plagiopyla frontata

| PRJEB65642 | ENA

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed.

2014-11-01 | GSE62901 | GEO

Determination of WatR binding site in Methylomonas sp. DH-1 after lactate adaptive evolution

Project description:JHM80 strain was obtained by adaptive evolution of Methylomonas sp. DH-1 strain against 8.0 g/L of lactate. The tolerance against lactate of JHM80 was obtained by the overexpression of watR (weak acid tolerance regulator). In order to discover the target genes of WatR, FLAG epitope tag was added to WatR of JHM80 strain and ChIP-seq was performed.

2023-08-08 | GSE206216 | GEO

Analysis of differential gene expression in the degradation of doxycycline by Chryseobacterium sp. WX1

Project description:We isolated an efficient doxycycline degrading strain Chryseobacterium sp. WX1. To investigate gene expression patterns during doxycyclinedegradation by strain WX1, we conducted a comparative transcriptomic analysis using cultures of strain WX1 with and without doxycycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Chryseobacterium sp. WX1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-12 | GSE242785 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data