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Aurum Assembly

ABSTRACT: Genome assembly of Mycobacterium aurum.

PROVIDER: PRJEB8229 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	CVQQ01.dat.gz	Other
	CVQQ01.fasta.gz	Fasta.gz
	CVQQ01.master.dat	Other
	CVQQ01.dat.gz	Other

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High concordance between SNPs identified by the porcine 60K BeadChip genotyping array (Illumina) and the assembly-versus-assembly method

Project description:Porcine 60K BeadChip genotyping arrays (Illumina) are increasingly being applied in pig genomics to validate SNPs identified by re-sequencing or assembly-versus-assembly method. Here we report that more than 98% SNPs identified from the porcine 60K BeadChip genotyping array (Illumina) were consistent with the SNPs identified from the assembly-based method. This result demonstrates that whole-genome de novo assembly is a reliable approach to deriving accurate maps of SNPs.

2016-07-05 | GSE83910 | GEO