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ABSTRACT: Metagenome assembly of PRJNA947933 data set (Time series of chicken stool metagenomics and egg metabolomics in changing production systems)

PROVIDER: PRJEB82471 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR23946404_cleaned.contigs.fa.gz	Other
	SRR23946406_cleaned.contigs.fa.gz	Other
	SRR23946405_cleaned.contigs.fa.gz	Other
	SRR23946409_cleaned.contigs.fa.gz	Other

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Project description:Time series of chicken stool metagenomics and egg metabolomics in changing production systems

| PRJNA947933 | ENA

Transcriptome analysis reveals differentially expressed genes associated with high rates of egg production in chicken hypothalamic-pituitary-ovarian axis

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Project description:Comparative analysis of gene expression profiles in newly developed housing systems is important to understand gene functions in chicken for adaptation and possible gene-environment interactions among layer lines. Therefore, the objective of this study was to characterize the molecular processes that are different among the two layer lines Lohmann Selected Leghorn (LSL) and Lohmann Brown (LB) using whole genome RNA expression profiles. Despite their approximately identical egg production performance these layer lines differ markedly in other phenotypic traits. The two layer lines were kept under the production environment of the newly developed small group housing system Eurovent German with two different group sizes and three tiers. We used a chicken RNA microarray to identify differentially expressed genes among the two layer lines LSL and LB.

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