Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

PSC co-culture DMXAA 32 samples IFNg 36 samples bulk RNA-seq

ABSTRACT: PSC co-culture DMXAA 32 samples IFNg 36 samples bulk RNA-seq

PROVIDER: PRJEB87271 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR14756800.fastq.gz	Fastqsanger.gz
	ERR14756801.fastq.gz	Fastqsanger.gz
	ERR14756802.fastq.gz	Fastqsanger.gz
	ERR14756803.fastq.gz	Fastqsanger.gz
	ERR14756804.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 68

Similar Datasets

PSC co-culture DMXAA 32 samples IFNg 36 samples bulk RNA-seq

Project description:Bulk RNAseq of pancreatic stellate cells (PSC) treated with DMXAA, interferon gamma or DMSO control. PSC were cultured alone as mono-cultures or in co-culture with mouse tumour organoids, The PSC were recovered by FACS using fluorecent protein mKate-2.

2025-03-19 | E-MTAB-14943 | biostudies-arrayexpress

PSC co-culture STING modulation 167 samples bulk RNA-seq

Project description:Bulk RNAseq of pancreatic stellate cells (PSC) and tumour cells treated with STING agonist DMXAA, STING inhibitor H151 or DMSO control. PSC were cultured alone as mono-cultures or in co-culture with mouse tumour organoids, The PSC and tumour cells were recovered by FACS using fluorecent proteins mKate-2 and tGFP, respectively.

2025-03-19 | E-MTAB-14946 | biostudies-arrayexpress

Neutrophil ifCAF conditioned media 18 samples bulk RNA-seq

Project description:Bone marrow-derived mouse neutrophils were cultured in vitro in conditioned media from pancreatic stellate cell (PSC) cultures where the PSCs were treated with the STING agonist DMXAA or vehicle control to induce an ifCAF phenotype.

2025-03-18 | E-MTAB-14934 | biostudies-arrayexpress

IFNg+ vs IFNg- Treg

Project description:Gene expression studies comparing IFNg+ Tregs versus IFNg- Tregs from human peripheral blood Ex vivo sorted Tregs (CD25highCD127neg) were stimulated for 4 hours and IFNg-secreting cells were detected by a IFNg-capture kit. The samples were resorted based on IFNg expression.

2016-07-01 | E-GEOD-71274 | biostudies-arrayexpress

Psc

Project description:Drosophila melanogaster Psc, Posterior sex combs, is differentially expressed in 14 experiment(s);

| FBgn0005624 | ExpressionAtlas

Psc

Project description:Drosophila melanogaster Psc, Posterior sex combs, is expressed in 4 baseline experiment(s);

| FBgn0005624 | ExpressionAtlas

Gene expression profiling of renal tissues isolated from C57BL/6J mice treated with DMXAA

Project description:Flavonoid derivative DMXAA, also known as vadimezan or ASA404, is considered one of the most promising vascular disrupting agents that displays remarkable antitumor properties. To investigate the effect of DMXAA on gene expression in renal tissues, C57BL/6J mice were intraperitoneal injected with DMXAA or vehicle (10 mg/kg daily) for three days, then renal tissues were harvested and performed RNA-seq.

2023-11-01 | GSE216295 | GEO

PSC co-culture day6 11 samples single cell RNA-Seq

Project description:The goal of this experiment is to characterize the different cancer associated CAF subtypes that can be induced by tumour-derived signlas in pancreatic stellate cells (PSC). Co-cultures of PSC and tumour organoids were seeded in matrigel and grown for 6 days in basal media. Mono-cultures of PSC were used as controls. The PSCs were recovered by flow cytometry and subjected to single cell RNA-seq profiling via the ddSeq-Surecell system.

2025-03-21 | E-MTAB-14944 | biostudies-arrayexpress

PSC co-culture STING modulation 167 samples bulk RNA-seq

Project description:PSC co-culture STING modulation 167 samples bulk RNA-seq

| PRJEB87277 | ENA

PSC co-culture day6 11 samples single cell RNA-Seq

Project description:PSC co-culture day6 11 samples single cell RNA-Seq

| PRJEB87411 | ENA