Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete genome of Bacillus amyloliquefaciens Co1-6

ABSTRACT: Complete genome sequence of Bacillus amyloliquefaciens strain Co1-6, a plant growth-promoting rhizobacterium of Calendula officinalis

PROVIDER: PRJEB9155 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	CVPA01.dat.gz	Other
	CVPA01.fasta.gz	Fasta.gz
	CVPA01.master.dat	Other
	CVPA01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Transcriptomics of Bacillus amyloliquefaciens SQR9 to maize root exudates

Project description:Root exudates play an important role in plant-microbe interaction. The transcriptional profilings of plant growth-promoting rhizobacteria Bacillus amyloliquefaciens SQR9 in response to maize root exudates under static condition, were investigated by an Illumina RNA-seq for understanding the regulatory roles of the root exudates.

2014-11-01 | GSE54987 | GEO

CO1 network analysis in poplar

Project description:We conducted microarray experiments by comparing constitutive constructs with appropriate controls, followed by the identification of downstream targets of Pro35S:CO1

2011-12-29 | GSE28689 | GEO

Vetulina CO1

Project description:Vetulina CO1

| PRJEB22961 | ENA

Differential RNA-seq of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42 Reveals sRNA Bas01 involved in Sporulation and Biofilm Formation

Project description:Bacillus amyloliquefaciens FZB42 is a representative organism for Gram positive soil bacteria associated with plant roots and beneficial to plant growth. It is of immense importance to understand mechanisms of this class of bacteria adapting to rhizosphere. In this work employing differential RNA sequencing (RNA-seq) and Northern blot, we systematically identified transcription start sites of mRNAs as well as non-coding regulatory RNAs in FZB42. The genes regulated at different growth phases and located in polycistronic operons were also identified. A set of genes were re-annotated. In addition, a sRNA named Bas01 was identified to be involved in Bacillus sporulation and biofilm formation. The result we obtained provides valuable data for investigation of Bacillus gene expression and molecular details of rhizobacterial interaction with host plants. Examination of transcriptome profile of rhizobacterium B. amyloliquefaciens FZB42 grown under six conditions.

2015-10-28 | E-GEOD-66681 | biostudies-arrayexpress

CO1 network analysis in poplar

Project description:We conducted microarray experiments by comparing constitutive constructs with appropriate controls, followed by the identification of downstream targets of Pro35S:CO1 Four samples of mature leaf tissues were collected from four independent lines of 35S:CO1 and pBI101. RNA was extracted from tissues and hybridized on Affymetrix Genechip Poplar Genome Array.

2011-12-29 | E-GEOD-28689 | biostudies-arrayexpress

FVB Partial Co1

Project description:FVB Partial Co1

| PRJEB13645 | ENA

Calendula officinalis

Project description:Calendula officinalis overview

| PRJNA889157 | ENA

Acetylome analysis of Bacillus amyloliquefaciens

Project description:Lysine acetylation is a major post-translational modification that plays an important regulatory role in almost every aspects in both eukaryotes and prokaryotes. Bacillus amyloliquefaciens, a Gram-positive bacterium, is very effective for the control of plant pathogens. Here, we conducted the first lysine acetylome in B. amyloliquefaciens through a combination of highly sensitive immune-affinity purification and high-resolution LC−MS/MS. Overall, we identified 3268 lysine acetylation sites in 1254 proteins. Acetylated proteins are associated with a variety of biological processes and a large fraction of these proteins are involved in metabolism. These data serves as an important resource for further elucidation of the physiological role of lysine acetylation in B. amyloliquefaciens.

2018-10-26 | PXD003339 | Pride

CO1 and CO2 network analysis in poplar

Project description:This SuperSeries is composed of the following subset Series: GSE28689: CO1 network analysis in poplar GSE28693: CO2 network analysis in poplar Refer to individual Series

2011-12-29 | E-GEOD-28706 | biostudies-arrayexpress

Project description:The complete chloroplast genome sequence of Calendula officinalis

| PRJNA1019102 | ENA