Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Yersinia enterocolitca isolates from retail food in the United Kingdom

PROVIDER: PRJNA1003829 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25584700_1.fastq.gz	Fastqsanger.gz
	SRR25584700_2.fastq.gz	Fastqsanger.gz
	SRR25584800_1.fastq.gz	Fastqsanger.gz
	SRR25584800_2.fastq.gz	Fastqsanger.gz
	SRR25584701_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 414

Similar Datasets

GNPS - 370 UK Pseudomonas

Project description:Extracts from 370 Pseudomonas fluorescens isolates from wheat from the United Kingdom.

2016-03-31 | MSV000079619 | GNPS

Transcriptomic analysis of biofilm formation in persistent and transient Listeria monocytogenes from the retail deli environment

Project description:Persistence of Listeria monocytogenes in retail deli environments is a serious food safety issue, potentially leading to cross-contamination of ready-to-eat foods such as deli meats, salads, and cheeses. We previously discovered strong evidence of L. monocytogenes persistence in delis across multiple states. We hypothesized that this was correlated with isolates’ innate characteristics, such as biofilm-forming capacity or gene differences.We further chose four isolates for RNA-sequencing analysis and compared their global biofilm transcriptome to their global planktonic transcriptome. Analysis of biofilm vs planktonic gene expression did not show the expected differences in gene expression patterns. Overall, L. monocytogenes persistence in the deli environment is likely a matter of poor sanitation and/or facility design, rather than isolates’ biofilm-forming capacity, sanitizer tolerance, or genomic content

2021-06-11 | GSE176617 | GEO

Project description:Retail food Klebsiella

| PRJNA1135353 | ENA

Project description:Genomic diversity and epidemiological significance of non-typhoidal Salmonella found in retail food collected in Norfolk, United Kingdom

| PRJNA939716 | ENA

Listeria monocytogenes

Project description:GenomeTrakr Project: United Kingdom, Food and Environment Research Agency

| PRJNA218587 | ENA

Salmonella enterica

Project description:GenomeTrakr Project: United Kingdom, Food and Environment Research Agency

| PRJNA259925 | ENA

Yersinia-food-LZP-2021

Project description:Yersinia food isolates LZP project lzp-2020/2-0418

| PRJEB49068 | ENA

Project description:Retail food long-read metagenomes

| PRJNA1107355 | ENA