Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Raw sequences data

PROVIDER: PRJNA1005895 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25659900_1.fastq.gz	Fastqsanger.gz
	SRR25659900_2.fastq.gz	Fastqsanger.gz
	SRR25660000_1.fastq.gz	Fastqsanger.gz
	SRR25660000_2.fastq.gz	Fastqsanger.gz
	SRR25660100_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1672

Similar Datasets

Prospective Collection of PillCam SB3 Videos and Raw Data Files for Future Developments (SODA)

Project description:Observational, Multicenter, Post-market, Minimal risk, Prospective data collection of PillCam SB3 videos (including PillCam reports) and raw data files and optional collection of Eneteroscopy reports

| 2291850 | ecrin-mdr-crc

Gene expression of ERAP2 proficient and deficient patient-derived organoids post IFNg-stimulation

Project description:RNA-seq analysis of total RNA isolated from patient-derived organoids established from eight individuals. The organoids are genotyped with regards to rs2910686. The analysis aimed at characterizing the epithelial gene expression changes in ERAP2 proficient vs. ERAP2 deficient patient-derived organoids. ***Please note that raw data is not provided as Norwegian law does not allow public access to human sequences raw data

2024-08-16 | GSE266208 | GEO

Genome-Wide Identification of ABA Responsive microRNAs in the stem of Populus euphratica

Project description:More then 10 million raw reads were acquiredIn total, 247 unique mature sequences which contain 149 conserved miRNA and 98 novel miRNAs were identified.

2018-12-01 | GSE107822 | GEO

Genome-Wide Identification of ABA Responsive microRNAs in the Root of Populus euphratica

Project description:More then 10 million raw reads were acquired. In total, 238 unique mature sequences which contain 142 conserved miRNA and 96 novel miRNAs were identified.

2018-12-01 | GSE107802 | GEO

Project description:Rhinolophus sinicus Raw Sequences Data

| PRJNA705004 | ENA

Manis javanica

Project description:Manis javanica Raw Sequences Data

| PRJNA641497 | ENA

Intestinal microbiota

Project description:Intestinal microbiota raw sequences data

| PRJNA1045724 | ENA

microRNA expression profiling in HPV-16/HIV associated Cervical Cancer

Project description:Identifying the differentially expressed miRNAs in Cervical cancer patients infected with only one virus i.e. either HIV or HPV-16 and patients infected with both viruses HIV and HPV-16 with respect to their controls which is the healthy population not infected by either HIV or any HPV The miRNA array was performed using the affymetrix GeneChip® miRNA 3.0 Array (Affymetrix, Santa Clara, California, United States). The chip was processed using a commercial Affymetrix array service (GeneTech Biotechnology Limited Company, Shanghai, China). The affymetrix GeneChip® miRNA 3.0 Array contains 2,999 probe sets unique to human, mouse and rat pre-miRNA hairpin sequences, 2,216 human snoRNA and scaRNA probe sets and covers 153 organisms (19,724 probe sets). Raw data sets were extracted from all Cel files (raw intensity file) after scanning of slides. These raw data sets were separately analyzed using Expression Console and GeneSpring GX12.5 software followed by differential miRNA expression, fold change & cluster analysis.

2018-08-01 | GSE81137 | GEO

Discovery of cis-spliced chimeric RNAs between adjacent genes in human prostate cells

Project description:Total RNA extracted from prostate cancer LNCaP cells transfected with siRNA against CTCF(siCTCF), or negative control siRNA (si-)were processed, and sequenced by two different companies using Illumina Hi-seq 2000 platform to generate RNA sequencing with two output sequences: paired-end 50bp and 101bp in read length. Nearly 100 million and 50 million raw reads were yielded from each sample respectively. We used FastQC to confirm the quality of raw fastq sequencing data, and SOAPfuse software to detect fusion transcripts.

2015-02-09 | GSE63487 | GEO