Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Difference of expression profile between tumor tissue and adjacent tissue in patients with pancreatic cancer

ABSTRACT: Difference of expression profile between tumor tissue and adjacent tissue in patients with pancreatic cancer

PROVIDER: PRJNA1007696 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25716763_1.fastq.gz	Fastqsanger.gz
	SRR25716763_2.fastq.gz	Fastqsanger.gz
	SRR25716765_1.fastq.gz	Fastqsanger.gz
	SRR25716765_2.fastq.gz	Fastqsanger.gz
	SRR25716767_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Difference of expression profile between tumor tissue and adjacent tissue in patients with pancreatic cancer

Project description:In order to explore the differences between tumor tissues and adjacent tissues of pancreatic cancer patients, we plan to find the differences in expression profiles between tumor tissues and adjacent tissues of pancreatic cancer patients by sequencing

2024-07-03 | GSE241330 | GEO

The difference of chromatin between tumor tissue and adjacent tissue in patients with pancreatic cancer

Project description:The difference of chromatin between tumor tissue and adjacent tissue in patients with pancreatic cancer

| PRJNA1007693 | ENA

The difference of chromatin between tumor tissue and adjacent tissue in patients with pancreatic cancer

Project description:In order to better study the differences between pancreatic cancer patients' tumor tissues and their adjacent tissues, we compared chromatin accessibility of pancreatic cancer tumor tissues and adjacent tissues of the same patient from the whole genome, in an effort to find meaningful research targets related to pancreatic cancer patients

2024-07-03 | GSE241327 | GEO

DNA methylation in human pancreatic cancer vs. adjacent normal pancreatic tissue

Project description:HumanMethylation 450K microarrays were used to identify aberrant DNA methylation in pancreatic adenocarcinoma (n=14), juice-circulating cancer cells (n=4), cancer associated fibroblasts (n=3), against adjacent normal pancreatic tissues (n=7) Bisulphite converted DNA from the 28 samples were hybridised to the Illumina HumanMethylation450 Beadchip v1.2

2020-10-12 | GSE74071 | GEO

Gene expression between normal and cancer tissue for pancreatic cancer in Japan

Project description:Transcriptomic analysis of cancer samples helps to identify the mechanism and molecular markers of cancer. However, transcriptomic analyses of pancreatic ductal adenocarcinoma from the Japanese population are lacking. We performed RNA sequencing of flesh or frozen pancreatic ductal adenocarcinoma tissues and adjacent normal pancreatic tissue from 12 Japanese patients to identify genes critical for the clinical pathology of pancreatic cancer among the Japanese population.

2022-02-09 | GSE196009 | GEO

RNA-sequencing: HNSCC tissue and adjacent normal tissue

Project description:RNA-sequencing: HNSCC tissue and adjacent normal tissue

| PRJNA668735 | ENA

Differential proteomics between AFP-negative HCC and adjacent non-tumor liver tissue

Project description:We screened and identified novel proteins in AFP-negative HCC tissue that were differentially expressed related to levels in adjacent non-tumor liver tissue using SWATH-MS proteome technology

2021-11-02 | PXD028854 | Pride

Tumor and adjacent normal tissue

Project description:Proteome characterization of 5 breast tumors and adjacent normal tissue using HiRIEF nanoLC-MS/MS.

2019-02-04 | PXD011385 | JPOST Repository

Digital spatial profiling of pancreatic ductal adenocarcinoma, acinar ductal metaplasia and adjacent normal pancreas tissue

Project description:Pancreatic ductal adenocarcinoma (PDAC) is the most important histological subtype of pancreatic cancer, accounting for approximately 90% of all pancreatic cancers.Acinar to ductal metaplasia (ADM) is a recently recognized, yet less well-studied, precursor lesion of PDAC developed in the setting of chronic pancreatitis. Through digital spatial mRNA profiling, we compared ADM and adjacent PDAC tissues from patient samples to unveil the bridging genes, bridging signaling pathway and bridging molecular function during the malignant transformation of pancreatitis.

2022-07-25 | GSE208536 | GEO

Microarray of pancreatic cancer and healthy tissue

Project description:Gene expression analyses of pancreatic adenocarcinoma and adjacent ductal epithelia from the same patient using bulk vs LCM dissected samples. Our results indicate that laser capture microdissection (LCM) is necessary to identify differentially expressed genes that discriminate between PDAC and healthy pancreatic ductal tissue. Pancreatic tissues were collected at time of surgery and snap frozen in liquid nitrogen for RNA extraction and Affymetrix GeneChip Expression analyses.

2014-12-31 | E-GEOD-27890 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data