Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IAH/VLA VA1 Virus Detection Array Dataset

ABSTRACT: IAH/VLA VA1 Virus Detection Array Dataset

OTHER RELATED OMICS DATASETS IN: GSE8746

PROVIDER: PRJNA102015 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

IAH/VLA VA1 Virus Detection Array Dataset

Project description:Data from the IAH/VLA diagnostic pathogen/virus detection microarray. The array platform for this data is GEO accession GPL5725 (provisional), and consists of 5824 oligos representing over 100 viral families, species and subtypes. The data set itself consists of 12 arrays, 4 hybridised with RNA from cell cultured foot-and-mouth disease virus (FMDV) type O, 3 hybridised with RNA from FMDV type A, 1 hybridised with RNA from a sheep infected with FMDV type O, and 4 hybridised with cell-cultured Avian Infectious Bronchitis virus (IBV). Keywords: Virus Detection Microarray

2007-08-14 | GSE8746 | GEO

VLA lyssavirus genotyping dataset

Project description:VLA lyssavirus genotyping dataset

| PRJNA112087 | ENA

Cross-species Detection in Barley1 GeneChip Array

Project description:Cross-species Detection in Barley1 GeneChip Array

| PRJNA149123 | ENA

Borreliella chilensis strain:VA1

Project description:Borreliella chilensis strain:VA1 Genome sequencing

| PRJNA266551 | ENA

Single-cell chromosomal imbalances detection by array CGH

Project description:In this study, we extend array CGH technology by making the accurate detection of segmental aneusomies possible from a single lymphoblast and fibroblast following Phi29 DNA polymerase amplification Keywords: array CGH, aCGH

2006-02-16 | GSE4244 | GEO

Vibrio anguillarum strain:VA1

Project description:Vibrio anguillarum strain:VA1 Genome sequencing and assembly

| PRJNA267040 | ENA

Vibrio anguillarum strain:VA1

Project description:Vibrio anguillarum strain:VA1 Genome sequencing and assembly

| PRJNA1153050 | ENA

Single-cell aneuploidy detection by array CGH

Project description:In this study, we extend array CGH technology by making the accurate detection of chromosomal imbalances possible from a single fibroblast and blastomere following Phi29 DNA polymerase amplification. Keywords: CGH

2006-02-01 | GSE3642 | GEO

Not gene expression based, methylation detection using cDNA array

Project description:genomic DNA hybridized to gene spots on the cDNA array was used for methylation detection using antibodies against 5methyl cytosine

2011-01-21 | GSE20216 | GEO

The Microbial Detection Array Combined with Random Phi29-Amplification used as a Diagnostic Tool for Unbiased Virus Detection in Clinical Samples

Project description:A common technique used for sensitive and specific diagnostic virus detection in clinical samples is PCR. However, an unbiased diagnostic microarray containing probes for all human pathogens could replace hundreds of individual PCR-reactions and remove the need for a clear clinical hypothesis regarding a suspected pathogen. We have established such a diagnostic platform for unbiased random amplification and subsequent microarray identification of viral pathogens in clinical samples. We show that Phi29 polymerase-amplification of a diverse set of clinical samples generates enough viral material for successful identification by the Microbial Detection Array developed at the Lawrence Livermore National Laboratory, California, USA, demonstrating the potential of the microarray technique for broad-spectrum pathogen detection. We conclude that this method detects both DNA and RNA virus, present in the same sample, as well as differentiates between different virus subtypes. We propose this assay for unbiased diagnostic analysis of all viruses in clinical samples.

2011-04-14 | GSE28597 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data