Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Plumbago zeylanica

ABSTRACT: Plumbago zeylanica Raw sequence reads

PROVIDER: PRJNA1031776 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26560008_1.fastq.gz	Fastqsanger.gz
	SRR26560008_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Plumbago zeylanica

Project description:Plumbago zeylanica EST project

| PRJNA12941 | ENA

Viridiplantae

Project description:Plumbago zeylanica Raw sequence reads

| PRJNA451074 | ENA

Plumbago auriculata

Project description:Plumbago auriculata overview

| PRJNA528135 | ENA

Plumbago auriculata

Project description:Plumbago auriculata Transcriptome or Gene expression

| PRJNA350306 | ENA

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Project description:Unravelling the phytome of Plumbago zeylanica through transcriptomics approach

| PRJNA470520 | ENA

Project description:De Novo transcriptome analysis of Plumbago zeylanica to understand Plumbagin biosynthesis pathway

| PRJNA507504 | ENA

Quantitative profiling of differentially expressed miRNAs in siCTL- and siOASL-transfected HUVECs

Project description:Purpose: The goal of this study is to compare endothelial small RNA transcriptome to identify the target of OASL under basal or stimulated conditions by utilizing miRNA-seq. Methods: Endothelial miRNA profilies of siCTL or siOASL transfected HUVECs were generated by illumina sequencing method, in duplicate. After sequencing, the raw sequence reads are filtered based on quality. The adapter sequences are also trimmed off the raw sequence reads. rRNA removed reads are sequentially aligned to reference genome (GRCh38) and miRNA prediction is performed by miRDeep2. Results: We identified known miRNA in species (miRDeep2) in the HUVECs transfected with siCTL or siOASL. The expression profile of mature miRNA is used to analyze differentially expressed miRNA(DE miRNA). Conclusions: Our study represents the first analysis of endothelial miRNA profiles affected by OASL knockdown with biologic replicates.

2022-09-06 | GSE186354 | GEO

Sequencing of siRNA from soybean containing silencing vectors and empty vectors

Project description:A cDNA library was constructed by Novogene (CA, USA) using a Small RNA Sample Pre Kit, and Illumina sequencing was conducted according to company workflow, using 20 million reads. Raw data were filtered for quality as determined by reads with a quality score > 5, reads containing N < 10%, no 5' primer contaminants, and reads with a 3' primer and insert tag. The 3' primer sequence was trimmed and reads with a poly A/T/G/C were removed

2021-07-21 | GSE180131 | GEO

Project description:Transcriptome analysis of young and mature leaf of Plumbago zeylanica L. for understanding plumbagin biosynthesis

| PRJNA839212 | ENA