Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression data from Mt/Gigi vs Mt root tissues

ABSTRACT: Gene expression data from Mt/Gigi vs Mt root tissues

OTHER RELATED OMICS DATASETS IN: GSE5467GSE5471GSE5477

PROVIDER: PRJNA104341 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Gene expression data from Mt/Gi vs Mt root tissues

Project description:Gene expression data from Mt/Gi vs Mt root tissues

| PRJNA104339 | ENA

Gene expression data from Mt/Gigi vs Mt root tissues

Project description:Most vascular flowering plants have the ability to form mutualistic associations with soil fungi from the Glomeromycota. The resulting symbiosis is called an arbuscular mycorrhiza and they are widespread in terrestrial ecosystems throughout the world. Significant alteration occurs at physiological and molecular levels in both symbionts. To gain a better understanding of the AM symbiosis, we use a 16000 feature oligonucleotide based array to examine gene expression in an arbuscular mycorrhizal symbioses, M. truncatula/Gigaspora gigantea. Keywords: Medicago truncatula, Mycorrhizal, Gigaspora gigantea, microarray profiling

2007-03-08 | GSE5471 | GEO

Gene expression data from Mt/Gi vs Mt root tissues

Project description:Most vascular flowering plants have the ability to form mutualistic associations with soil fungi from the Glomeromycota. The resulting symbiosis is called an arbuscular mycorrhiza and they are widespread in terrestrial ecosystems throughout the world. Significant alteration occurs at physiological and molecular levels in both symbionts. To gain a better understanding of the AM symbiosis, we use a 16000 feature oligonucleotide based array to examine gene expression in an arbuscular mycorrhizal symbioses, M. truncatula/G. intraradices. Keywords: Medicago truncatula, Mycorrhizal, Glomus intraradices, microarray profiling

2007-03-08 | GSE5467 | GEO

Gene expression data from Sh-Mt-Gi vs Mt shoot tissues

Project description:Most vascular flowering plants have the ability to form mutualistic associations with soil fungi from the Glomeromycota. The resulting symbiosis is called an arbuscular mycorrhiza and they are widespread in terrestrial ecosystems throughout the world. Although the physical interaction between the symbionts occurs in the root cortex, the symbiosis impacts the physiology of the whole plant. To gain a better understanding of the AM symbiosis, we have used the 16000 feature array to examine gene expression in the leaves of mycorrhizal plants to explore the transcriptional changes that are triggered systemically as a result of the AM symbiosis. Keywords: Medicago truncatula, Mycorrhizal, systemic regulation, microarray profiling

2007-03-08 | GSE5472 | GEO

glioblastoma(GBM) tissues: Tumor tissues(C) vs. Normal tissues(N)

Project description:glioblastoma(GBM) tissues: Tumor tissues(C) vs. Normal tissues(N)

| PRJNA431408 | ENA

Gene expression in shoot and root tissues (wild-type, ospipt6-KO)

Project description:To examine differential effect of the mutation of rice OsPIPT6 on the gene exoression in shoot and root tissues, we performed microarray analysis using shoot and root tissues of wild-type and ospipt6-KO mutant.

2023-08-09 | GSE210819 | GEO

Gene expression in shoot and root tissues (wild-type, oshho3-KO)

Project description:To examine differential effect of the mutation of rice OsHHO3 on the gene exoression in shoot and root tissues, we performed microarray analysis using shoot and root tissues of wild-type and oshho3-KO mutant.

2024-06-19 | GSE206432 | GEO

nar nodule vs root transcriptome-analysis of symbiotic root nodule development

Project description:12plex_medicago_2014_02 - nar nodule vs root transcriptome - which are the genes differentially expressed in alfalfa spontaneous (non rhizobium-infected) nodules vs. control roots? - biological material: aeroponically grown cuttings of a Medicago sativa (alfalfa) accession that produces empty nodules when nitrogen-starved. Samples for transcriptome comparison: isolated NAR nodules (10 days post N-starvation) vs. roots of the same plants (pools of 3 roots).

2018-11-01 | GSE121571 | GEO

Tumor tissues vs normal tissues from 21 cases ESCA

Project description:Tumor tissues vs normal tissues from 21 cases ESCA

| PRJNA822374 | ENA

microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula

Project description:To identify key miRNAs involved in root meristem formation in M. truncatula, deep sequencing was used to compare the miRNA populations dreived from four tissues. These were; root tip tissue, containing the root apical meristem, elongation zone tissue, root forming callus tissue and non-root forming callus tissue. We identified 83 previously reported miRNAs, 24 new to M. truncatula, in 44 families. For the first time in M. truncatula, members of conserved miRNA families mir165, miR181 and miR397 were found. Bioinformatic analysis identified 38 potential novel miRNAs. Many miRNAs were differentially expressed between tissues, particularly RFC and NRFC.

2013-04-03 | GSE45726 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data