Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Surgical Site Infections (SSI)

PROVIDER: PRJNA1048498 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27112000_1.fastq.gz	Fastqsanger.gz
	SRR27112000_2.fastq.gz	Fastqsanger.gz
	SRR27112001_1.fastq.gz	Fastqsanger.gz
	SRR27112001_2.fastq.gz	Fastqsanger.gz
	SRR27112002_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 138

Similar Datasets

human gut metagenome

Project description:Surgical Site Infections

| PRJNA1178665 | ENA

human gut metagenome

Project description:Surgical site infection (SSI) 16S rRNA amplicon sequencing

| PRJNA991438 | ENA

Standard Versus Advanced Antimicrobial Dressing Containing Ionic Silver Following Colorectal Cancer Surgery

Project description:The purpose of this study is to evaluate the efficacy of treatment with hydrofibre dressing in comparison with the efficacy of standard dressing in terms of prevalence of surgical site infections (SSI) in patients who underwent colorectal resection for malignancy.

| 2078310 | ecrin-mdr-crc

Value of Butyrylcholinesterase as a Marker of Surgical Site Infection Following Surgery for Colorectal Diseases

Project description:Butyrylcholinesterase (BChE) is an α-glycoprotein synthesized in the liver. BchE’s serum level decreases in many clinical conditions such as acute and chronic liver damage, inflammation, injury and infections, and malnutrition. The Investigators prospectively evaluate patients undergoing elective procedures for colorectal diseases. Blood samples are collected preoperatively (at day 0), post-operatively in the recovery room (day 1), and on the subsequent four days (days 2, 3, 4, and 5) for assessment of BChE, C-reactive protein, and white blood cell concentrations. The same surgical team operates all patients and is blinded to the study. Patients are monitored for post-operative infection by using standard laboratory and clinical methods. If surgical site infection (SSI) is suspected the wound is swabbed and empirical antibiotics are started. The aim of the current trial is to study whether BChE is a reliable marker for the presence of SSI in patients undergoing colorectal surgery.

| 2366924 | ecrin-mdr-crc

Preoperative mechanical bowel preparation in patients with colon cancer

Project description:Interventions: Standard therapy group 2L of Niflex as mechanical bowel preparation trial therapy group no mechanical bowel preparation Primary outcome(s): incisional surgical site infection (SSI) Study Design: Parallel Randomized

| 2628847 | ecrin-mdr-crc

The incidence of surgical site infections after laparoscopic colorectal surgery using monofilament absorbable suture material

Project description:Primary outcome(s): The incidence of surgical site infections after laparoscopic colorectal surgery using monofilament absorbable suture material within 30 days after surgery

| 2659719 | ecrin-mdr-crc

The influence of two policies of closure of the laparotomy wound in the rate of surgical site infection in colorectal cancer surgery: the New Operation trial

Project description:Study hypothesis: A decreased faecal load in the surgical wound diminished the incidence of surgical site infection. Primary outcome(s): Incidence of surgical site infection. The criteria to define surgical site infection are described by Disease Control and Prevention National Healthcare Safety Network (Spain). For the purposes of this study superficial and deep wound infections would be considered as a unique entity condition. This will be measured 30 days after the operation.

| 2413447 | ecrin-mdr-crc

Effect of Vitamin E Ointment on Incisional SSI in Colorectal Surgery

Project description:A prospective, randomized study was performed. The patients were randomized into 2 groups: those patients undergoing subcutaneous vitamin E ointment application (Group 1) and those patients who not (Group 2). Incisional surgical site infection (SSI), microbiological cultures from the infected surgical wounds, postoperative pain and acute phase reactants were investigated.

| 2218879 | ecrin-mdr-crc

Project description:Genome analysis of Pseudomonas aeruginosa recovered from surgical site infections in two Ghanaian hospitals

| PRJNA1015653 | ENA

Tissue niche influences immune and metabolic profiles to Staphylococcus aureus biofilm

Project description:Infection is a devastating post-surgical complication, often necessitating additional procedures and prolonged antibiotic therapy. This is especially relevant for craniotomy and prosthetic joint infections, both of which are characterized by biofilm formation on the bone or implant surface, respectively, with S. aureus representing a primary cause. The effectiveness of immune responses to these infections is predicated on both host- and pathogen-derived signals in the infection microenvironment. However, the extent to which these signals differ across distinct tissue niches and influence immune function remains relatively unknown. Using mouse models of S. aureus craniotomy and prosthetic joint infection complemented with patient samples from both infectious modalities, we show profound metabolomic, transcriptomic, and functional differences that are dependent on tissue niche. These signatures were both spatially and temporally distinct, differing not only between surgical site infections but evolving over time within a single model. These findings highlight the unique immune attributes of biofilms that are heavily influenced by the local tissue microenvironment, which will likely have important implications when designing therapeutic approaches to target specific infections.

2024-07-08 | GSE252481 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data