Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Complete mitochondrial genome data and phylogenetic analysis of Jogocerus viraktamathi (Xue & Zhang, 2017) (Cicadellidae: Idiocerinae) next-generation sequencing data

PROVIDER: PRJNA1050026 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27384407_1.fastq.gz	Fastqsanger.gz
	SRR27384407_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:The complete mitochondrial genome of Anidiocerus bimaculatus Zhang, Li & Qi, 2008 (Hemiptera: Cicadellidae: Idiocerinae)

| PRJNA1050006 | ENA

Project description:Complete mitochondrial genome and phylogenetic analysis of Amritodus flavoscutatus Cai et Shen, 1998 (Insecta: Hemiptera: Cicadellidae)

| PRJNA1050025 | ENA

Integrative genomic and proteomic analysis of response of Lactobacillus casei str. Zhang to glucose limitation

Project description:Nutrient starvation is an important survival challenge for bacteria during industrial production of functional foods. Lactobacilli are increasingly being used as probiotics in functional foods. As next-generation sequencing technology has greatly advanced, we performed integrative proteomic and genomic analysis to investigate the response of Lactobacillus casei Zhang to a glucose-restricted environment. L. casei Zhang strains were permitted to evolve in glucose-limited or normal medium from a common ancestor over a 3-year period, and they were sampled after 1000, 2000, 3000, 4000, 5000, 6000, 7000, and 8000 generations and subjected to proteomic and genomic analyses. Genomic resequencing data revealed different point mutations and other mutational events in each generation of L. casei Zhang under glucose limitation stress. The proteins expressed differentially under glucose limitation were found to be significantly related to fructose and mannose metabolism, carbohydrate metabolic processes, lyase activity, and amino acid-transporting ATPase activity. The integrative proteomic and genomic analysis revealed that the mutations protected L. casei Zhang against glucose starvation by regulating other cellular carbohydrate, fatty acid, and amino acid catabolism; phosphoenolpyruvate system pathway activation; glycogen synthesis; ATP consumption; pyruvate metabolism; and general stress response protein expression. The results help reveal the mechanisms of adapting to glucose starvation and provide new strategies for enhancing the industrial utility of L. casei Zhang.

2018-02-08 | PXD006643 | Pride

Fieberiella septentrionalis

Project description:The complete mitochondrial genome of Fieberiella septentrionalis (Hemiptera: Cicadellidae: Deltocephalinae)

| PRJNA705294 | ENA

Transcriptomic profiling of endometrial primary tumors

Project description:Fresh tumor tissue from primary endometrial tumors. Technology: L1000 is an array based technology that measured 978 landmark genes that are extrapolated using an algorithm to generate a transcription profile of 12,328 genes. Reference L1000 technology: Subramanian A, et al. A Next Generation Connectivity Map: L1000 Platform And The First 1,000,000 Profiles. Cell. 2017/12/1. 171(6):1437–1452.

2021-07-06 | E-MTAB-10668 | biostudies-arrayexpress

Project description:Complete mitochondrial genome and phylogenetic analysis of "Mohe" tilapia

| PRJNA791748 | ENA

Project description:Sweden next generation sequencing data

| PRJNA1194318 | ENA

Project description:Taxonomic and phylogenetic studies of the subfamily Cicadellinae (Hemiptera: Cicadellidae)

| PRJNA863844 | ENA

Project description:The first complete mitochondrial genome of Ophiocordyceps gracilis voucher YHH OG201301 by next-generation sequencing

| PRJNA627096 | ENA

Project description:Complete mitochondrial genome data and phylogenetic analysis of Papilio dialis Leech, 1893 (Lepidoptera: Papilionoidea: Papilionidae)

| PRJNA1039984 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data