Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Paddy soil viromes and metagenomes

PROVIDER: PRJNA1059524 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27422724_1.fastq.gz	Fastqsanger.gz
	SRR27422724_2.fastq.gz	Fastqsanger.gz
	SRR27422725_1.fastq.gz	Fastqsanger.gz
	SRR27422725_2.fastq.gz	Fastqsanger.gz
	SRR27422726_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 37

Similar Datasets

Paddy soil

Project description:Paddy soil Raw sequence reads (viromes)

| PRJNA997447 | ENA

Proteomics of Nitrospirae - Rice paddy Nitrospirae encode and express genes related to sulfate respiration: proposal of the new genus Candidatus Sulfobium

Project description:We present the draft genome of Nitrospirae bacterium Nbg-4 as a representative of this clade and couple this to in situ protein expression under sulfate-enriched and sulfate-depleted conditions in rice paddy soil. The proteins were extracted from the soil and analysed via LC-MS/MS measurements.

2018-01-08 | PXD007817 | Pride

Project description:Paddy soil metagenomes with/out arsenic contamination

| PRJNA1068274 | ENA

Project description:Paddy soil metagenomes in SY and TC.

| PRJNA1065390 | ENA

A study to investigate the effects of long-term organic and integrated fertilization on soil microbial community

Project description:Microbes play key roles in diverse biogeochemical processes including nutrient cycling. However, responses of soil microbial community at the functional gene level to long-term fertilization, especially integrated fertilization (chemical combined with organic fertilization) remain unclear. Here we used microarray-based GeoChip techniques to explore the shifts of soil microbial functional community in a nutrient-poor paddy soil with long-term (21 years).The long-term fertilization experiment site (set up in 1990) was located in Taoyuan agro-ecosystem research station (28°55’N, 111°27’E), Chinese Academy of Sciences, Hunan Province, China, with a double-cropped rice system. fertilization at various regimes.

2020-09-19 | GSE104014 | GEO

soil viromes

Project description:soil viromes

| PRJEB82642 | ENA

Project description:Reef Seawater Metagenomes Viromes and Proximity Ligated Samples

| PRJNA975592 | ENA

Soil viromes raw reads

Project description:Soil viromes of Australia

| PRJNA1133219 | ENA

Gene expression data from ileal intestine of chickens

Project description:Paddy rice with husk can be availbale for chicken dietary resource instead of yellow corn. Ingestion of paddy rice potentially affects on gastrointestinal physiology and function including digestion/absorption of nutrients and gut barrier function such as mucosal immunity, but the details of changes is unknown. To obtain insight into the physiological modifications in the small intestine of chickens fed paddy rice, we conducted a comprehensive analysis of gene expression in small intestine by DNA microarray. In the paddy rice group, a total of 120 genes were elevated >1.5-fold in the paddy rice group, whereas a total of 159 genes were diminished < 1.5-fold. Remarkably, the gene expression levels of IGHA (immunoglobulin heavy chain α), IGJ (immunoglobulin J chain), and IGLL1 (immunoglobulin light chain λ chain region), which constitute immunoglobulin A, decreased 3 to 10 times in the paddy rice group.

2024-09-22 | GSE277733 | GEO

Project description:Paddy soil

| PRJNA669269 | ENA