Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudomonas psychrophila strain:Bighead carp | isolate:Bighead carp

ABSTRACT: Pseudomonas psychrophila strain:Bighead carp | isolate:Bighead carp Genome sequencing and assembly

PROVIDER: PRJNA1062608 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Characterization and comparative profiling of microRNA transcriptomes in bighead carp and silver carp

Project description:We applied high throughput sequencing technology to identify microRNA genes in bighead carp and silver carp. We identified 167 conserved miRNAs in bighead carp and 166 in silver carp. By two computational stragegies, we obtained 39 novel miRNAs in bighead carp and 54 in silver carp, for which, no homologs were found in other species. Several miRNA* sequences were found in our dataset as well, some particular ones might have gene regulation function. Gain and loss of family members were observed in several miRNA families, which partially reflected the fate of miRNA gene duplicates. Total RNA of juvenile bighead carp and silver carp were sequenced on one Solexa lane, respectively.

2010-09-01 | E-GEOD-22232 | biostudies-arrayexpress

Characterization and comparative profiling of microRNA transcriptomes in bighead carp and silver carp

2010-09-01 | GSE22232 | GEO

Pseudomonas psychrophila

Project description:Pseudomonas psychrophila overview

| PRJNA170950 | ENA

Pseudomonas psychrophila

Project description:Pseudomonas psychrophila Genome sequencing

| PRJNA847639 | ENA

Pseudomonas psychrophila

Project description:Pseudomonas psychrophila Raw sequence reads

| PRJNA782782 | ENA