Project description:State-of-the-art algorithms for m6A detection and quantification via nanopore direct RNA sequencing have been continuously developed, little is known about their capacities and limitations, which makes a comprehensive assessment in urgent need. Therefore, we performed comprehensive benchmarking of 10 computational tools relying on current-based and base-calling “errors” strategies for m6A detection by nanopore sequencing.
2023-03-01 | GSE195618 | GEO
Project description:Variant calling for cpn60 barcode sequence-based microbiome profiling
| PRJNA625735 | ENA
Project description:Quantifying the effect of Oxford Nanopore technology error rate on variant calling
| PRJNA749274 | ENA
Project description:A unified haplotype-based method for accurate and comprehensive variant calling
| PRJNA694520 | ENA
Project description:Evaluation of available variant calling tools for Oxford Nanopore sequencing in Breast cancer
| PRJNA865100 | ENA
Project description:Quantifying the effect of Oxford Nanopore technology sequencing error rate on variant calling
| PRJNA749325 | ENA
Project description:variant calling of evolved yeast
Project description:DNA WGS Long Read Sequence (PromethION) for manuscript titled: "Performance of Somatic Structural Variant Calling in Lung Cancer using Oxford Nanopore Sequencing Technology"
