Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genomic sequencing, comparative genomics, and phylogenetic analysis of cannabis (Cannabis sativa L), Punto Rojo x Cherry Pie.

PROVIDER: PRJNA1090028 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR27372672_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Project description:Genomic sequencing, comparative genomics, and phylogenetic analysis of cannabis (Cannabis sativa L), Punto Rojo and Cherry Pie

| PRJNA1090025 | ENA

Project description:Genomic sequencing, comparative genomics, and phylogenetic analysis of cannabis (Cannabis sativa L), Cherry Pie.

| PRJNA1090024 | ENA

Project description:Genomic sequencing, comparative genomics, and phylogenetic analysis of cannabis (Cannabis sativa L), Punto Rojo.

| PRJNA1058441 | ENA

Genomic sequencing, comparative genomics, and phylogenetic analysis of cannabis (Cannabis sativa L).

Project description:Genomic sequencing, comparative genomics, and phylogenetic analysis of cannabis (Cannabis sativa L).

| PRJEB73483 | ENA

In silico gene expression profiling of Cannabis sativa

Project description:Even if a large amount of high-throughput functional genomic data exists, most researchers feature a strong background in molecular biology but lack advanced bioinformatics skills. In this work, publicly available gene expression datasets have been analyzed giving rise to a total of 40,224 gene expression profiles within different Cannabis tissues/developmental stages. The resource here proposed will provide researchers with a starting point for future investigations of Cannabis sativa.

2017-01-13 | GSE93201 | GEO

HOPE-Genomics Intervention for the Improvement of Cancer Patient Knowledge of Genomics

Project description:This clinical trial studies the effectiveness of a web-based cancer education tool called Helping Oncology Patients Explore Genomics (HOPE-Genomics) in improving patient knowledge of personal genomic testing results and cancer and genomics in general. HOPE-Genomics is a web-based education tool that teaches cancer/leukemia patients, and patients who may be at high-risk for developing cancer, about genomic testing and provide patients with information about their own genomic test results. The HOPE-Genomics tool may improve patient’s genomic knowledge and quality of patient-centered care. In addition, it may also improve education and care quality for future patients.

| 2378933 | ecrin-mdr-crc

Transcriptomic Responses of Cannabis sativa L. to Trichoderma hamatum Treated under Drought Conditions

Project description:Cannabis sativa L., which has been reclassified as an agronomic crop, has experienced an increase in cultivation. Its interactions with a variety of environmental stressors have been extensively studied. However, the mechanisms of recovery through fungal associations remain underexplored. Trichoderma hamatum, known for its role as a biological agent, enhances plant growth and provides antagonistic defense against pathogenic microbes. This meta-dataset aims to investigate whether Th can enhance drought resistance in a Cannabis plants.

2024-05-08 | GSE266916 | GEO

A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

Project description:Histones and associated chromatin proteins have essential functions in eukaryotic genome organization and regulation. Despite this fundamental role in eukaryotic cell biology, we lack a phylogenetically-comprehensive understanding of chromatin evolution. Here, we combine comparative proteomics and genomics analysis of chromatin in eukaryotes and archaea. Proteomics uncovers the existence of histone post-translational modifications in Archaea. However, archaeal histone modifications are scarce, in contrast with the highly conserved and abundant marks we identify across eukaryotes. Phylogenetic analysis reveals that chromatin-associated catalytic functions (e.g., methyltransferases) have pre-eukaryotic origins, whereas histone mark readers and chaperones are eukaryotic innovations. We show that further chromatin evolution is characterized by expansion of readers, including capture by transposable elements and viruses. Overall, our study infers detailed evolutionary history of eukaryotic chromatin: from its archaeal roots, through the emergence of nucleosome-based regulation in the eukaryotic ancestor, to the diversification of chromatin regulators and their hijacking by genomic parasites

2022-08-12 | PXD031991 | Pride

PPH21 - various plant species in negative ionisation mode

Project description:MS2 spectra of Arabidopsis thaliana; Brassica oleracea; Cannabis sativa; Capsicum annuum; Datura stramonium and Solanum lycopersicum obtained via liquid chromatography / Q exactive mass spectrometry in negative ionisation mode.

2023-01-10 | MSV000091031 | MassIVE

PPH21 - various plant species in positive ionisation mode

2023-01-10 | MSV000091030 | MassIVE