ABSTRACT: Whole genome sequencing of Mycobacterium tuberculosis complex as part of SA Pathology surveillance activities in South Australia, Australia - Raw sequence reads
Project description:Whole genome sequencing of Streptococcus pneumoniae as part of SA Pathology surveillance activities in South Australia, Australia - Raw sequence reads
Project description:Whole genome sequencing of Mycobacterium tuberculosis as part of The Institute of Clinical Pathology and Medical Research - NSW Health Pathology surveillance activities in New South Wales, Australia
| PRJNA1128841 | ENA
Project description:Whole genome sequencing of Mycobacterium tuberculosis as part of QMRL surveillance activities in Queensland, Australia
Project description:The overall goal of the project is to identify candidate biomarkers of Active infection with Mycobacterium tuberculosis (Mtb) in individuals with or without HIV. Samples were analyzed from two tuberculosis (TB) endemic countries, Brazil and South Africa (SA), as well as from the United States (US). The US site included patients that were in the early stages of Active TB, with mean symptom duration of 1.5 months. The subjects from the Brazil site had mean symptom duration of 6 months, and the SA site subjects had advanced TB. All sites also provided samples asymptomatic for TB or with Latent TB infection. The US and SA sites also had subjects with and without HIV co-infection, whereas the Brazilian subjects were all HIV-. This specific dataset corresponds to the Discovery step of the study, for the US center.
Project description:Time-course expression analysis profiling whole blood samples collected from healthy South African adolescents while monitoring their potential acquisition of a Mycobacterium tuberculosis infection.
Project description:Whole genome sequencing of Salmonella species as part of The Institute of Clinical Pathology and Medical Research - NSW Health Pathology surveillance activities in New South Wales, Australia
Project description:Whole genome sequencing of Shigella species as part of The Institute of Clinical Pathology and Medical Research - NSW Health Pathology surveillance activities in New South Wales, Australia
