Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genome sequencing of Cotton leaf curl virus in Cotton growing area of North India

PROVIDER: PRJNA1126039 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29681979_1.fastq.gz	Fastqsanger.gz
	SRR29681979_2.fastq.gz	Fastqsanger.gz
	SRR29681980_1.fastq.gz	Fastqsanger.gz
	SRR29681980_2.fastq.gz	Fastqsanger.gz
	SRR29681981_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Project description:Genome sequencing of Cotton leaf curl virus prevalent in Faridkot, Punjab, India

| PRJNA1049598 | ENA

Global Analysis of the Transcriptional Response of Whitefly to Tomato Yellow Leaf Curl China Virus (TYLCCNV)

Project description:We investigated the transcriptional response of invasive B. tabaci B biotype to tomato yellow leaf curl China virus (TYLCCNV) using Illumina sequencing technology. We found that 1,606 genes involved in 157 biochemical pathways were differentially expressed in the viruliferous whiteflies. Culture of B biotype whitefly was maintained on cotton plants. Three thousands of newly emerged adults of whitefly on cotton were released onto the leaves of healthy and viruliferous tobacco plants. They were allowed to feed for 24 h. After that, non-viruliferous and viruliferous whiteflies were transferred respectively to cotton plants in different cages and allowed to feed for 120 h. Then approximately 1,000 non-viruliferous and viruliferous female adults of whitefly were collected, respectively. The RNA was extracted and sequenced using Illunima Analyzer II.

2011-03-22 | E-GEOD-24374 | biostudies-arrayexpress

Expression data in response to pepper leaf curl virus (PepLCV) infection in Chili pepper at three leaf stage

2012-10-11 | GSE41131 | GEO

Expression data from the process of chilling stress causing Alternaria alternata infection and leading to cotton leaf senescence

Project description:Cotton premature leaf senescence often occurred with an increasing frequency in many cotton growing areas and caused serious reduction in yield and quality of cotton has been one of the impontant factors that restrict severely the production of cotton.Our laboratory studies showed chilling stress is the key factor that induced A. alternatia infection, caused Alternaria disease and then lead to cotton leaf senescence, but the molecular mechanism of cotton premature leaf senscence is still unclear. We used microarrays to study molecular mechanism of chilling stress causing Alternaria alternata infection and leading to cotton leaf senescence and find the key genes during this process.

2015-10-28 | GSE74412 | GEO

Global Analysis of the Transcriptional Response of Whitefly to Tomato Yellow Leaf Curl China Virus (TYLCCNV)

2011-03-22 | GSE24374 | GEO

Expression data in response to pepper leaf curl virus (PepLCV) infection in Chilli pepper at three leaf stage

Project description:A comparative study to determine the pepper leaf curl virus resistance machanism between resistant and susceptible genotypes at three leaf stage. To study the molecular mechanism of pepper leaf curl virus (PepLCV) resistance, pepper plants were exposed to PepLCV through artificial inoculation and hybridization on Agilent tomato microarrays. The expression analysis of PepLCV resistant and susceptible genotypes after artificial inoculation at three leaf stage showed that the resistance against PepLCV is due to sum of expression of hundreds of genes at a particular stage. Tomato microarrays consisting of 43,803 probes were used for whole genome expression analysis of chilli peppers for resistance against PepLCV. Transcripts from the leaves of resistant (BS-35) and susceptible plants (IVPBC-535) were compared in response to PepLCV inoculation at three leaf stage.

2012-10-11 | E-GEOD-41131 | biostudies-arrayexpress

Squash leaf curl virus

Project description:Squash leaf curl virus Genome sequencing

| PRJNA260246 | ENA

Transcriptomic analysis of tomato plants infected by the geminivirus TYLCSV

Project description:Gene expression of tomato plants infected by Tomato yellow leaf curl Sardinia virus (TYLCSV) and mock inoculated were compared.

2014-02-01 | E-MEXP-3953 | biostudies-arrayexpress

Hanley-Bowdoin ArabidopsisCaLCuV 12dpi

Project description:Effect of geminivirus Cabbage leaf curl virus on Arabidopsis Col-0 at 12 days post-inoculation during short day conditions.

2008-07-30 | E-ATMX-34 | biostudies-arrayexpress

Cotton leaf curl Gezira betasatellite

Project description:Cotton leaf curl Gezira betasatellite overview

| PRJNA69645 | ENA