Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Biofilms and microbiomes on plastic debris in the ocean

PROVIDER: PRJNA1130660 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29673344_1.fastq.gz	Fastqsanger.gz
	SRR29673344_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:Biofilms on Plastic Debris and the Microbiome

| PRJNA1129439 | ENA

Project description:Biofilms on Plastic Debris and the Microbiome

| PRJNA1130412 | ENA

Plastisphere metaproteomics optimisation dataset

Project description:Optimisation of DNA-protein co-extraction from the thin microbial biofilm inhabiting marine plastic debris for meta-omics and comparative metaproteomics analysis.

2023-06-20 | MSV000092214 | MassIVE

Project description:Plastisphere microbial community composition on marine plastic debris

| PRJNA558771 | ENA

Differential gene expression between Salmonella Typhimurium biofilms on glass vs cholesterol surfaces

2013-07-09 | GSE48604 | GEO

Project description:Biofilm formation and community succession on marine plastic debris

| PRJNA801434 | ENA

Project description:Microbial communities associated with plastic debris in freshwater ecosystems

| PRJNA1063702 | ENA

Project description:Microbial communities on plastic debris in the Mediterranean Sea

| PRJNA698954 | ENA

Project description:Bacteria community on polycarbonate plastic biofilms

| PRJNA1059257 | ENA

Differential gene expression between Salmonella Typhimurium biofilms on glass vs cholesterol surfaces

Project description:Salmonella spp. biofilms have been implicated in persistence in the environment and plant surfaces. In addition, Salmonella is able to form biofilms on the surface on cholesterol gallstones. The ability of Salmonella spp. on these surfaces is superior to biofilm formation on surfaces on glass or plastic. Thus, we hypothesized that Salmonella gene expression is specific during biofilm development on cholesterol surfaces. Flow through assays were performed whereby S. Typhimurium was inoculated into chambers coated with glass or cholesterol. At 24h post-inoculation, planktonic (from the flow through), biofilms (from glass or cholesterol) were collected. Thus we had 4 samples: Planktonic (2) and Biofilms (2), each with 2 biological replicates

2013-07-09 | E-GEOD-48604 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data