Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [FastATAC-seq]

ABSTRACT: PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [FastATAC-seq]

PROVIDER: PRJNA1138423 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29907627_1.fastq.gz	Fastqsanger.gz
	SRR29907627_2.fastq.gz	Fastqsanger.gz
	SRR29907628_1.fastq.gz	Fastqsanger.gz
	SRR29907628_2.fastq.gz	Fastqsanger.gz
	SRR29907629_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [RNA-seq]

Project description:Dysfunction of group II innate lymphoid cells (ILC2s) plays an important role in the development of type II inflammation-related diseases such as asthma and pulmonary fibrosis. Notably, neural signals are increasingly recognized as pivotal regulators of ILC2s. However, how ILC2s intrinsically modulate their responsiveness to these neural signals is still largely unknown. Here, using single-cell RNA sequencing and bulk mRNA sequencing, we report that the immune regulatory molecule PAC1 (phosphatase of activated cells 1) selectively promotes the signaling of neuropeptide CGRP (calcitonin gene-related peptide) in ILC2s. Moreover, PAC1 is necessary for ensuring the expression of CGRP-response genes by influencing chromatin accessibility. In summary, our study demonstrates that PAC1 is an important regulator of ILC2 responses and we propose that PAC1 is a potential target for therapeutic interventions of type II inflammation-related diseases.

2024-09-29 | GSE272723 | GEO

PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [FastATAC-seq]

2024-09-29 | GSE272722 | GEO

PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [scRNA-seq]

2024-09-29 | GSE272724 | GEO

PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [RNA-seq]

Project description:PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [RNA-seq]

| PRJNA1138422 | ENA

PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [scRNA-seq]

Project description:PAC1 constrains type II inflammation through promotion of CGRP signaling in ILC2s [scRNA-seq]

| PRJNA1138424 | ENA

Neuropeptide CGRP limits ILC2 responses and constrains type 2 inflammation

Project description:Innate and adaptive lymphocytes work in concert to maintain tissue homeostasis and to mediate host defense at mucosal barriers. Herein, we used single cell analysis to show substantial diversity of gene expression in ILCs and T helper cells during a helminth infection in the lung. Notably, we found that the Calca gene, which is spliced to generate the neuropeptide CGRP, was selectively transcribed in ILC2s and Th2 cells in an activation dependent manner. The Calca locus acquired chromatin accessibility at the ILC2 precursor stage and is pre-programmed for rapid production of CGRP upon ILC2 activation. CGRP globally antagonized actions of neuromedin U (NMU) and the alarmin IL-33. However, CGRP selectively acted in concert with NMU and IL-33 to promote IL-5 expression, but not IL-13. The complex interplay among neuropeptides and alarmin fine-tunes type 2 immune responses and will undoubtedly become more relevant as therapeutic neuropeptide blockade advances in the clinic.

2019-06-25 | GSE131996 | GEO

Neuropeptide CGRP limits ILC2 responses and constrains type 2 inflammation

Project description:Neuropeptide CGRP limits ILC2 responses and constrains type 2 inflammation

| PRJNA545529 | ENA

Pac1+/+ versus Pac1-/- TG-macrophages_LPS 6h

2006-01-10 | GSE3993 | GEO

Transcription profiling of mouse macrophaes and mast cells from Pac1+/+ versus Pac1-/- animals

Project description:This SuperSeries is composed of the following subset Series:; GSE3993: Pac1+/+ versus Pac1-/- TG-macrophages_LPS 6h; GSE3994: Pac1+/+ versus Pac1-/- BMMCs_IgE-DNP 2 h Experiment Overall Design: Refer to individual Series

2008-06-12 | E-GEOD-4014 | biostudies-arrayexpress

Transcription profiling of mouse Pac1+/+ versus Pac1-/- TG-macrophages treated with LPS - 6h

Project description:LPS-stimulated macrophages from Pac1+/+ and Pac1-/- mice were compared to assess gene expression changes in the absence of PAC-1 (also known as Dual specificity phosphatase 2). Experiment Overall Design: Age matched Pac1+/+ and Pac1-/- littermates were used to obtain equal numbers of thiolycollate-elicited macrophages. Pure populations of macrophages were stimulated with 100 ng/ml of LPS for 6 hours. 6 hours was chosen to assess mainly inflammatory gene expression.

2008-06-12 | E-GEOD-3993 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data