Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arachis hypogaea

ABSTRACT: WGRS data of MAGIC poupulations Founder Parents and other parental genotypes ICG14482, ICG7190, ICG11515, ICGV97183, TAG24, ICG3053, ICGV02022, ICGV02266, 55-437, ICGV 86031, ICGV02251, ICGV12014, ICGV88145, ICGV91278, ICGV97045, ICV89104, GPBD4, U47-5, VRR245, ICG51

PROVIDER: PRJNA1143160 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30108675_1.fastq.gz	Fastqsanger.gz
	SRR30108675_2.fastq.gz	Fastqsanger.gz
	SRR30108676_1.fastq.gz	Fastqsanger.gz
	SRR30108676_2.fastq.gz	Fastqsanger.gz
	SRR30108677_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 23

Similar Datasets

Arachis hypogaea

Project description:GBS sequencing data for the RIL population JL24 and 55-437 in peanut

| PRJNA972878 | ENA

Arachis hypogaea

Project description:GBS sequencing data for the RIL population JL 24 x 55-437 in peanut

| PRJNA973209 | ENA

Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines

Project description:We produced RNA-Seq reads from messenger RNA isolated from root tissue for the 19 MAGIC founder accessions (inbred strains) of Arabidopsis thaliana (see Gan et al. 2011. Nature 477:419-23 for a description of the MAGIC genetic mapping resource). The read data was generated with biological replication (two replicates). The resulting RNA-Seq data provide a resource to assess root gene expression across different accessions of A. thaliana. Comparable RNA-Seq read data for the MAGIC founder accessions for aerial seedling tissue has previously been released under GEO series GSE30720 (Gan et al. 2011. Nature, 477:419-23). Examination of RNA expression in root for the 19 Arabidopsis thaliana accessions used as parents for the MAGIC lines (parental accessions are Bur-0, Can-0, Col-0, Ct-1, Edi-0, Hi-0, Kn-0, Ler-0, Mt-0, No-0, Oy-0, Po-0, Rsch-4, Sf-2, Tsu-0, Wil-2, Ws-0, Wu-0, Zu-0).

2013-12-11 | E-GEOD-53198 | biostudies-arrayexpress

Arachis hypogaea

Project description:GBS of multiparent (MAGIC) population in peanut

| PRJNA1133227 | ENA

Arachis hypogaea

Project description:WGRS for 10 peanuts to identify genome wide SNPs and CNVs

| PRJDB10473 | ENA

Arachis hypogaea

Project description:WGRS data of high oleic groundnut varieties "Girnar 4 & Girnar 5"

| PRJNA999952 | ENA

Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines

2013-12-11 | GSE53198 | GEO

Arachis genus

Project description:WGRS data of Arachis species

| PRJNA1002116 | ENA

Project description:RMUP MAGIC Cotton Parents

| PRJNA789329 | ENA

Role of carbohydrate moieties in peanut (Arachis hypogaea) peroxidases.

Project description:The activities of a cationic (C.PRX) and an anionic peroxidase isolated from peanut (Arachis hypogaea)-cell suspension culture were drastically reduced when they were deglycosylated with glycopeptidase F or oxidized by 10 mM-periodate. In contrast with the controls, the deglycosylated or the oxidized peroxidases were much more susceptible to proteolytic degradation. In radiolabelling experiments with [35S]methionine, the non-glycosylated C.PRX was synthesized in the tunicamycin-treated cultures and secreted into the medium. Examination of the C.PRX polypeptides by SDS/polyacrylamide-gel electrophoresis followed by fluorography showed that the non-glycosylated form had an Mr of approx. 31,000, which is about 78% of that of the glycosylated form. Our results suggest that carbohydrates may not be essential for peroxidase secretion, but that stabilization of the peroxidase molecules and acquisition by these isoenzymes of a catalytically active conformation is linked directly or indirectly to glycosylation.

| S-EPMC1133399 | biostudies-other

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data