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Effect of APC depletion on gene expression in JEG-3 cells

ABSTRACT: Effect of APC depletion on gene expression in JEG-3 cells

PROVIDER: PRJNA1144136 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR30126683_1.fastq.gz	Fastqsanger.gz
	SRR30126683_2.fastq.gz	Fastqsanger.gz
	SRR30126684_1.fastq.gz	Fastqsanger.gz
	SRR30126684_2.fastq.gz	Fastqsanger.gz
	SRR30126685_1.fastq.gz	Fastqsanger.gz

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Effect of APC depletion on gene expression in JEG-3 cells

Project description:Fetal-maternal immune tolerance guarantees a successful pregnancy throughout gestation. HLA-G, a non-classical human leukocyte antigen (HLA) molecule exclusively expressed in extravillous trophoblasts (EVT), is a crucial factor in establishing fetal-maternal immune tolerance by interacting with inhibitory receptors on various maternal immune cells residing in the uterus. While trophoblast specific Cis-Regulatory Elements (CREs) impacting HLA-G transcription have been described, the identity of trans-acting factors controlling HLA-G expression in EVT remains poorly understood. Utilizing a genome-wide CRISPR-Cas9 knockout screen, we find that the WNT signaling pathway negatively regulates HLA-G expression in EVT. APC is a key component of the destruction complex for cytoplasmic β-catenin, switching off the canonical WNT pathway. This dataset containes the transcriptomics in JEG-3 cells upon APC knockout.

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