Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bulk RNA-sequencing of human intestinal organoid cells

ABSTRACT: Bulk RNA-sequencing of human intestinal organoid cells

PROVIDER: PRJNA1152961 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR30416535.fastq.gz	Fastqsanger.gz
	SRR30416536.fastq.gz	Fastqsanger.gz
	SRR30416537.fastq.gz	Fastqsanger.gz
	SRR30416538.fastq.gz	Fastqsanger.gz
	SRR30416539.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 32

Similar Datasets

Bulk RNA-sequencing of human intestinal organoid cells

Project description:We focused on a rare cell population of human intestine, the M cells. Using human intestinal organoid as a model, the M cells could be differentiated, FACS-enriched and analyzed by RNA-seq.

2024-08-30 | GSE275771 | GEO

Bulk RNA sequencing of human intestinal and airway organoids

Project description:Bulk RNA sequencing was performed on intestinal and airway organoids. Also airway organoid derived air-liquid interface cultures were sequenced

2021-08-17 | GSE181514 | GEO

Single-cell RNA-sequencing of human intestinal organoid cells

2024-08-30 | GSE275772 | GEO

Single-cell RNA-sequencing of human intestinal organoid cells

Project description:We focused on a rare cell population of human intestine, the BEST4+ cells. Using human intestinal organoid as a model, the BEST4+ cells could be differentiated, FACS-enriched and analyzed by scRNA-seq, together with the BEST4- cell lineages such as the enterocytes, goble cells and EECs.

2023-09-13 | GSE242765 | GEO

Single cell sequencing of human intestinal organoid cells.

Project description:Unbiased and FACS was performed on human intestinal organoid cells and coupled to single cell sorting by the SortSeq protocol (Muraro et al., 2016).

2021-08-17 | GSE181560 | GEO

Single-cell RNA-sequencing of human intestinal organoid cells

Project description:Single-cell RNA-sequencing of human intestinal organoid cells

| PRJNA1152960 | ENA

Single-cell RNA-sequencing of human intestinal organoid cells

Project description:Single-cell RNA-sequencing of human intestinal organoid cells

| PRJNA1014471 | ENA

Human intestinal organoid cell transcriptomic profiling

Project description:Human intestinal organoid cell transcriptomic profiling

| PRJNA623537 | ENA

Single cell sequencing of human intestinal organoid cells.

Project description:Single cell sequencing of human intestinal organoid cells.

| PRJNA752578 | ENA

Bulk RNA-seq of MilliporeSigma 3DGro human patient-derived gastrointestinal organoid lines compared to SCC300 human iPSC-derived colon organoid line

Project description:Transcriptomic profiles of 6 commercially-available human patient-derived gastrointestinal organoid lines were obtained and compared to transcriptomic profile of a commercially available human iPSC-induced colon organoid line. Transcriptomic profile of iPSC-derived human colon organoid line was compared after culture in either Corning growth-factor-reduced Matrigel (Corning 356231) or MilliporeSigma growth-factor-reduced ECMGel (E6909)

2022-03-31 | E-MTAB-11557 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data