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Effect of in vitro co-culturing of Lactobacillus crispatus on gene expression of Enterococcus faecalis OG1RF

ABSTRACT: Effect of in vitro co-culturing of Lactobacillus crispatus on gene expression of Enterococcus faecalis OG1RF

PROVIDER: PRJNA1171789 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR30951419_1.fastq.gz	Fastqsanger.gz
	SRR30951419_2.fastq.gz	Fastqsanger.gz
	SRR30951420_1.fastq.gz	Fastqsanger.gz
	SRR30951420_2.fastq.gz	Fastqsanger.gz
	SRR30951421_1.fastq.gz	Fastqsanger.gz

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Effect of in vitro co-culturing of Lactobacillus crispatus on gene expression of Enterococcus faecalis OG1RF

Project description:Enterococci are opportunistic pathogens notorious for causing a variety of infections. While both Enterococcus faecalis and Lactobacillus crispatus are commensal residents of the vaginal tract, the molecular mechanisms that enable E. faecalis to outcompete L. crispatus, and consequently cause vaginal infections remains unknown. To begin to address this, we need to gain a better understanding of the competitive interactions between E. faecalis and L. crispatus. Here, we employed a RNAseq approach to identify adaptive genes and transcriptional networks that enable E. faecalis to compete with L. crispatus.

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Transcriptomes of Enterococcus faecalis OG1RF and OG1RF Δbph in planktonic culture

Project description:Liquid cultures of Enterococcus faecalis OG1RF and OG1RF Δbph were grown in tryptic soy broth without added dextrose (TSB-D) for 2 and 4 hr. At each time point, the transcriptomes were compared to identify differentially expressed genes in the Δbph mutant.

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Proteomics of phage VPE25 treated Enterococcus faecalis OG1RF relative to untreated controls

Project description:E. faecalis OG1RF cultures were infected with lytic phage VPE25 and proteomic profile of infected cells were compared to uninfected E. faecalis cells using 1D-LC-MS/MS analyses.

2024-07-27 | PXD026873 | Pride

Genome-wide Analysis of Enterococcus faecalis OG1RF Gene Expression During Infection

Project description:Changes in Enterococcus faecalis OG1RF gene expression during infection in a rabbit model of subdermal abscess formation were studied using microarray analysis.

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Enterococcus faecalis OG1RF vs. Δrel mutants under control or mupirocin-treated conditions

Project description:Transcriptional profiling to define the stringent response regulon and significance of basal (p)ppGpp levels in E. faecalis OG1RF.

2011-12-20 | GSE34561 | GEO

Genome-wide Analysis of Enterococcus faecalis OG1RF(pCF10) Gene Expression During Infection

Project description:Changes in Enterococcus faecalis OG1RF(pCF10) gene expression at 4 hours post-infection in a rabbit model of subdermal abscess formation were studied using RNA-seq analysis.

2017-02-09 | GSE58467 | GEO

Enterococcus faecalis OG1RF vs. Δrel mutants under control or mupirocin-treated conditions

Project description:Transcriptional profiling to define the stringent response regulon and significance of basal (p)ppGpp levels in E. faecalis OG1RF. RNA was extracted from four replicate samples of each strain of interest and labeled with Cy3. For each replicate, labeled RNA was hybridized to slides along with Cy5-labeled reference RNA, extracted from E. faecalis OG1RF cells grown to mid-log.

2011-12-20 | E-GEOD-34561 | biostudies-arrayexpress

RNA-seq of phage VPE25 treated Enterococcus faecalis OG1RF relative to untreated controls

Project description:Temporal transcriptomic response of Enterococcus faecalis OG1RF during phage VPE25 infection

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Enterococcus faecalis OG1RF

Project description:Enterococcus faecalis OG1RF Genome sequencing

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Enterococcus faecalis OG1RF

Project description:Enterococcus faecalis OG1RF Genome sequencing

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