Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Pea seedling root transcriptome data

PROVIDER: PRJNA1178836 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR31203008_1.fastq.gz	Fastqsanger.gz
	SRR31203008_2.fastq.gz	Fastqsanger.gz
	SRR31203009_1.fastq.gz	Fastqsanger.gz
	SRR31203009_2.fastq.gz	Fastqsanger.gz
	SRR31203010_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

Gene expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment

Project description:Transcriptome analysis of root development related genes in terrestrial and hydroponic ramie. Ramie seedlings were cultivated in soil, and in hydroponic with the shoot-cutting propagation method. The root samples from hydrophonic ramie were collected from the early stage (5-day-old seedling) and the late stage (30-day-old seedling) of acquatic roots induction. The roots of ramie seedling cultivated in soil were also collected for comparative analysis. Our study represents the detailed analysis of ramie root transcriptomes with biologic replicates.

2017-09-15 | GSE98903 | GEO

Project description:Pea root mycobiomes

| PRJNA526546 | ENA

Detection of expression differences between Col-0 and ozs3 (overly zinc sensitive 3)

Project description:The Zn-hypersensitive EMS mutant ozs3 (overly zinc sensitive) shows some additional pleiotropic effects compared to Col-0 wildtype. Most severe effects are a complete growth arrest at 4°C (seedling stage) and an altered root morphology even under control conditions. To detect the underlying transcriptional differences we analyzed the root transcriptome under control and cold stress (4°C, 24h) conditions.

2020-04-07 | GSE113547 | GEO

Transcriptomes of Norway spruce seedling roots

Project description:We examine the development of the seedling roots based on two sets of data: one includes segments of the roots and one includes laser capture microdissection (LCM) root tissues.

2024-06-20 | GSE178534 | GEO

Transcript Profiling of Arabidopsis Plant Life Cycle

Project description:This series contain all stages Arabidopsis plant development. Stages of development includes unfertilized ovule, 24-Hr post-fertilization seed, globular stage seed, cotyledon stage seed, mature green seed, post-mature green seed, post-germination seedling, rosette leaf, root, stem, and floral bud. Keywords = Arabidopsis Keywords = Seed development Keywords = seedling Keywords = germination Keywords = leaf Keywords = root Keywords = stem Keywords = floral bud Keywords: ordered

2005-01-01 | GSE680 | GEO

Root transcriptome profiling in chilling-sensitive tomato (S. lycopersicum cv. Moneymaker) and the more cold-tolerant wild tomato S. habrochaites LA1777 compared at optimal and suboptimal temperature.

Project description:In this study the root transcriptome profiles of young seedlings (5 days after germination at 23C) of two tomato species differing in cold tolerance were analysed and compared after a subsequent treatment for 3 days at 23 or 15C by RNAseq. Aim was to elucidate molecular mechanisms underlying root development associated with suboptimal-temperature tolerance during early seedling establishment.

2016-07-24 | E-MTAB-4855 | biostudies-arrayexpress

Dosage effect on small RNA transcripts in maize copy number alterations

Project description:We sequenced 10 small RNA samples. 6 samples were taken from the 14-day old maize seedling tissue, and the other 4 samples were taken from 14-day old maize root tissue.

2015-09-04 | GSE71959 | GEO

Project description:Transcriptome data of pea leaves

| PRJNA752108 | ENA

Pea Seedling Mitochondrial Lysine Acetylome

Project description:Posttranslational lysine acetylation is believed to occur in all taxa and to affect thousands of proteins. In contrast to the hundreds of mitochondrial proteins reported to be lysine-acetylated in non-plant species, only a handful have been reported from the plant taxa previously examined. To investigate whether this reflects a biologically significant difference or merely a peculiarity of the samples thus far examined, we immunoenriched and analyzed acetylated peptides from highly purified pea seedling mitochondria using mass spectrometry. Our results indicate that a multitude of mitochondrial proteins, involved in a variety of processes, are acetylated in pea seedlings.

2014-05-01 | PXD000495 | Pride

Drought responsiveness dynamics in wheat

Project description:Wheat seedling root transcritpome under well watered and water limited treatments for two genotypes, Svevo and IL20-2

2020-12-18 | GSE163450 | GEO