Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pandanus amaryllifolius

ABSTRACT: Pandanus amaryllifolius overview

PROVIDER: PRJNA1205061 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR31319802_1.fastq.gz	Fastqsanger.gz
	SRR31319802_2.fastq.gz	Fastqsanger.gz
	SRR31344724_1.fastq.gz	Fastqsanger.gz
	SRR31344724_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 13

Similar Datasets

Pandanus amaryllifolius

Project description:EST-SSR analysis of Pandanus amaryllifolius

| PRJNA908997 | ENA

Pandanus amaryllifolius cultivar:PA006

Project description:Genome sequencing and assembly of Pandanus amaryllifolius

| PRJNA1189859 | ENA

Pandanus odorifer

Project description:Pandanus odorifer overview

| PRJNA928139 | ENA

Pandanus boninensis

Project description:Pandanus boninensis Organism overview

| PRJNA167991 | ENA

Project description:Pandanus amaryllifolius

| PRJNA692823 | ENA

Pandanus amaryllifolius drought stress and recovery LC-MSMS TMT-Labelled

Project description:The aim of this project is to determine the protein changes of P. amaryllifolius in response to drought stress and during recovery. The protein changes between drought-stressed, well-watered, and recovered plants were evaluated using tandem mass tags (TMT)-based quantitative proteomics. The proteins were extracted from sample by using TCA/Acetone method and digested with trypsin. The digested proteins were then labelled with 10-plex TMT labelling prior fractionation with 12.5%, 17.5%, and 50% ACN with 0.1% triethylamine. The prepared proteins were then subjected to 1D data dependent acquisition (DDA) with nano LC column ionization source was set as positive ion mode, whereby 350-1850 m/z peptide precursors were scanned at 70,000 resolutions. The raw data generated was then searched against Viridiplantae protein sequences downloaded from UniProt. Of the 1,415 differentially abundant proteins, 74 were significantly altered. The majority of proteins differing between them were related to carbon metabolism, photosynthesis, stress response, and antioxidant activity. This is the first study that reports the protein changes in response to drought stress in Pandanus. The data generated provide an insight into the drought-responsive mechanisms in P. amaryllifolius.

2022-02-16 | PXD028784 | Pride

Pandanus boninensis

Project description:Pandanus boninensis transcriptome project

| PRJDA67377 | ENA

Pandanus odorifer

Project description:De NoVo Transcriptome sequencing of salinity tolerant Pandanus odorifer

| PRJNA389238 | ENA

Pandanus, with Sararanga and Freycinetia as outgroups

Project description:Pandanus Plastome Phylogenetics Project

| PRJNA832688 | ENA

Project description:Pandanus Root Microbiome

| PRJNA778910 | ENA