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TRPC1 links calcium signaling to cellular senescence in the protection against post-traumatic osteoarthritis

ABSTRACT: TRPC1 links calcium signaling to cellular senescence in the protection against post-traumatic osteoarthritis

PROVIDER: PRJNA1216926 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR32166248_1.fastq.gz	Fastqsanger.gz
	SRR32166248_2.fastq.gz	Fastqsanger.gz
	SRR32166249_1.fastq.gz	Fastqsanger.gz
	SRR32166249_2.fastq.gz	Fastqsanger.gz
	SRR32166250_1.fastq.gz	Fastqsanger.gz

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TRPC1 links calcium signaling to cellular senescence in the protection against post-traumatic osteoarthritis

Project description:Transient receptor potential channel 1 (TRPC1) is a widely expressed mechanosensitive ion channel located within the endoplasmic reticulum membrane, crucial for refilling depleted internal calcium stores during activation of calcium-dependent signaling pathways. Here, we have demonstrated that TRPC1 activity is protective within cartilage homeostasis in the prevention of cellular senescence associated cartilage breakdown during mechanical and inflammatory challenge. We revealed that TRPC1 loss is associated with early stages of osteoarthritis (OA) and plays a non-redundant role in calcium signaling in chondrocytes. Trpc1-/- mice subjected to destabilization of the medial meniscus induced OA developed a more severe OA phenotype than wild type controls. During early OA development, Trpc1-/- mice displayed an increased chondrocyte survival rate, however remaining cells displayed features of senescence including p16INK4a expression and decreased Sox9. RNA sequencing identified differentially expressed genes related to cell number, apoptosis and extracellular matrix organization. Trpc1-/- chondrocytes exhibited accelerated dedifferentiation, while demonstrating an increased susceptibility to cellular senescence. Targeting the mechanism of TRPC1 activation may be a promising therapeutic strategy in osteoarthritis prevention.

2025-02-10 | GSE288320 | GEO

Early transcriptome and proteome changes in an in vivo model of post-traumatic osteoarthritis

Project description:Synovium mRNA expression data derived from a pig model of post-traumatic osteoarthritis. Samples were collected from both knees of control pigs (n=6x2=12) and injured knees of pigs that went under unilateral anterior cruciate ligament transection 1, 5, 9 and 14 days after surgery (n=6 per time-point).

2015-03-01 | E-MTAB-3186 | biostudies-arrayexpress

Transcriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis

Project description:36 Yucatan minipigs underwent anterior cruciate ligament (ACL) transection and were randomly assigned in equal numbers to no further treatment, reconstruction or ligament repair. Cartilage was harvested at 1 and 4 weeks post-operatively and histology and RNA-sequencing performed. The generated data served to identify the molecular pathophysiology present in early post-traumatic osteoarthritis (PTOA), as well as differences between surgical treatments.

2017-10-22 | E-MTAB-5879 | biostudies-arrayexpress

Transcriptional Profiling of Synovium in a Porcine Model of Early Post-traumatic Osteoarthritis

Project description:36 Yucatan minipigs underwent anterior cruciate ligament (ACL) transection and were randomly assigned in equal numbers to no further treatment, reconstruction or ligament repair. Peri-meniscal synovium was harvested at 1 and 4 weeks post-operatively and histology and RNA-sequencing performed. The generated data served to identify the molecular pathophysiology present in inflamed synovium during the early development of post-traumatic osteoarthritis (PTOA), as well as differences between surgical treatments.

2018-04-21 | E-MTAB-6664 | biostudies-arrayexpress

Bulk RNA-seq analyses of mandibular condylar cartilage in a post-traumatic temporomandibular joint osteoarthritis rabbit model

Project description:We performed gene expression profiling analysis using data obtained from RNA-seq of 2 different cells from post-traumatic temporomandibular joint osteoarthritis model to investigate the signaling pathways critical for cellular functions during temporomandibular joint osteoarthritis pathology.

2023-05-25 | GSE232867 | GEO

Single-cell RNA-Seq reveals changes in immune landscape in post-traumatic osteoarthritis

Project description:Osteoarthritis (OA) is the most common joint disease, affecting over 300 million people world-wide. Accumulating evidence attests to the important roles of immune system in OA pathogenesis. Understanding the role of various immune cells in joint degeneration or joint repair after injury is helpful for improving therapeutic strategies for treating OA. Post-traumatic osteoarthritis (PTOA) develops in ~50% of individuals who have experienced an articular trauma like an anterior cruciate ligament (ACL) rupture. Here, using highly sensitive single-cell RNA sequencing technology, we delineated the temporal dynamics of immune cell accumulation in the mouse knee joint after ACL rupture.

2022-07-18 | GSE200843 | GEO

Utility of circulating serum miRNAs as biomarkers of early cartilage degeneration in animal models of post-traumatic osteoarthritis and inflammatory arthritis

Project description:The purpose of this study was to identify potential serum microRNA (miRNA) biomarkers of cartilage degeneration comparing preclinical mouse models of post-traumatic osteoarthritis and inflammatory arthritis.

2016-09-11 | GSE81139 | GEO

Lef1 Ablation Alleviates Cartilage Mineralization during Post-traumatic Osteoarthritis

Project description:Lef1 Ablation Alleviates Cartilage Mineralization during Post-traumatic Osteoarthritis

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Function of the porcine TRPC1 gene in myogenesis and muscle growth

Project description:Muscle growth is a quantitative trait controlled by multiple genes in animals. Previously, we showed that transient receptor potential channel 1 (TRPC1) was a differentially expressed gene in muscle tissues between pig breeds with divergent growth traits using RNA-seq. In this study, we characterized the expression profiles of TRPC1 in different tissues and various pig breeds, and found that TRPC1 is highly expressed in muscle. We found two effective single nucleotide polymorphism (SNP) sites (C-1763T and C-1604T) in TRPC1 that could affect the activity of the promoter region and regulate the growth rate of pigs. Functionally, we used RNAi and overexpression to illustrate that TRPC1 promotes myoblast proliferation, migration, differentiation, fusion, and muscle hypertrophy, while inhibiting muscle degradation, and that these processes may be mediated by activating the Wnt signaling pathways. Taken together, our results revealed that TRPC1 may be a promoter of muscle growth and development and it plays a role in Wnt-mediated myogenesis.

2020-11-07 | GSE160972 | GEO

Small non-coding RNAs as biomarkers of musculoskeletal ageing and osteoarthritis

Project description:Mouse serum and joint small RNAs from young, old and a post traumatic model of osteoarthritis.

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